Gene Information

Name : Halsa_2338 (Halsa_2338)
Accession : YP_003996096.1
Strain : Halanaerobium hydrogeniformans sapolanicus
Genome accession: NC_014654
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 2564163 - 2565329 bp
Length : 1167 bp
Strand : -
Note : TIGRFAM: nucleotide sugar dehydrogenase; KEGG: bse:Bsel_3032 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase

DNA sequence : 
ATGAAAATAACTGTTTCAGGTGCAGGATATGTAGGTTTATCTAATGCAGTACTCTTGGCTCAAAACCATGAGGTAACAAC
GGTAGATATAGTTGAGGAAAAAGTTGAGATGATAAATAGAAAAGAATCTCCAATTGTGGATGCTGAATTAGAAGATTATT
TAAAAAACAAGGAACTAAATTTAACTGCAACCATTGATGCAATTAAAGCATATCGAGAGGCCGATTTCGTAATAATTGCT
ACTCCGACCAATTATGATCCTGATCAAAACTATTTTAATACACGTACAGTTGAGGCTGTTGTTGCTAATGTGCTTTCTTT
AAATGAAGATGCTGTAATGATTATTAAATCTACAGTTCCAGTAGGTTATACGAGAGAACTCCGCAAGAAATTTAATACAG
AAAATATAATTTTTTCTCCTGAATTTTTGCGGGAAGGTAAGGCTCTATATGATAATTTATATCCATCTCGAATTATTATT
GGTGAAAAATCAGAGAGAGCAGAAAAGTTTGCTGAGCTTCTCAAAGAAGGGGCAATCAAAAAAGATATTCCAACCCTGTA
TACGGATTCTACAGAAGCTGAAGCAATTAAACTTTTTGCAAATACATATCTTGCTATGAGAGTCTCCTTTTTCAATGAAC
TTGATACCTATGCTGAGATTAGAAATTTAGACAGCAGACAAATTATTGAAGGAGTAGGGCTTGATCCTAGAATCGGAGAT
CATTATAATAACCCTTCTTTTGGTTATGGAGGTTATTGTTTGCCCAAAGATACCAAACAACTTTTAGCTAATTATGAGGA
TGTACCTAATAATATAATGCAGGCAATAGTAGATGCTAATAGAACCAGAAAAGATCATATTGCTGATATGGTTATAAAAA
TGGAGCCAGAAGTGGTTGGTGTGTATAGGCTGACCATGAAAAAAGATTCCGATAACTTTCGACAGTCATCAGTACAGGGT
GTAATGAAAAGAATTAAGGCTAAGGGGATAGAAGTAATTGTATATGAACCGGTTCTAGAAGATGATCAGTTTTATCGCTC
GAAAGTAATTGAAGATCTTGATAAATTCAAAGAAAAAGCAGATATAATAGTCGCCAACAGAATGAGTGATAAACTTAAAG
ATGTAGAAGATAAGGTTTATACAAGAGATTTATTTAATAACAACTAA

Protein sequence : 
MKITVSGAGYVGLSNAVLLAQNHEVTTVDIVEEKVEMINRKESPIVDAELEDYLKNKELNLTATIDAIKAYREADFVIIA
TPTNYDPDQNYFNTRTVEAVVANVLSLNEDAVMIIKSTVPVGYTRELRKKFNTENIIFSPEFLREGKALYDNLYPSRIII
GEKSERAEKFAELLKEGAIKKDIPTLYTDSTEAEAIKLFANTYLAMRVSFFNELDTYAEIRNLDSRQIIEGVGLDPRIGD
HYNNPSFGYGGYCLPKDTKQLLANYEDVPNNIMQAIVDANRTRKDHIADMVIKMEPEVVGVYRLTMKKDSDNFRQSSVQG
VMKRIKAKGIEVIVYEPVLEDDQFYRSKVIEDLDKFKEKADIIVANRMSDKLKDVEDKVYTRDLFNNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-92 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halsa_2338 YP_003996096.1 nucleotide sugar dehydrogenase VFG0963 Protein 7e-104 57