Gene Information

Name : Halsa_2305 (Halsa_2305)
Accession : YP_003996066.1
Strain : Halanaerobium hydrogeniformans sapolanicus
Genome accession: NC_014654
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2531188 - 2532066 bp
Length : 879 bp
Strand : +
Note : KEGG: cce:Ccel_1858 pyridoxal biosynthesis lyase PdxS; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein

DNA sequence : 
ATGGAAAACACTTATAGGCTTAATAAAAATCTAGCTCAAATGTTAAAAGGTGGAGTGATAATGGATGTTACCAACAGCCA
GGAGGCCAAAATTGCTGAAAAAGCAGGCGCTGTTGCGGTAATGGCATTAGAAAGAGTCCCGGCAGATATCAGAAAAGATG
GCGGTATTGCCAGGATGTCAGATCCAAAAATGATCAAAGAAATAGTAAATTCTGTTTCTATACCTGTAATGGCTAAAGTT
AGAATTGGTCATTTTGTAGAAGCGCAAATTTTAGAAGCACTTGCTATTGATTTTATTGATGAAAGTGAAGTACTTACACC
TGCTGATGAAAAATATCATATTGACAAAGAAAAATTTAAGATCCCATTTGTTTGTGGGGCAAAAAATTTAGGAGAAGCGC
TCAGAAGAATTGGAGAAGGTGCAGCTATGATTAGAACTAAAGGTGAAGCCGGAACCGGTAATGTAGTTGAAGCAGTTCGC
CATATTAGAACAATTAACAGAGAAATCAAAGAACTATCTTTAATGGAAAGTGAAGAATTAATGACAGCTGCCAAAGAAAT
GGGTGCCCCTTATGATTTAATTAAATATGTAAATGAAAACCATAAATTACCGGTTGTTAATTTTGCAGCAGGGGGAATCG
CTACTCCAGCTGATGCTGCTTTAATGATGCAGTTAGGCTGTGATGGCATTTTTGTCGGTTCTGGAATCTTCCGTTCGGGC
AACCCAACAAAAAGAGCAGAAGCTATTGTTGAAGCTGTTACTCATTATCAAGATTCAAAAATATTAGCCAGAATTTCAGA
AGATTTGGGTAAGGCAATGTCTGGACTTGATATAAAAGGGTTGAGTGAAGAAGAAAAAATGTCAAATAGAGGCTGGTAA

Protein sequence : 
MENTYRLNKNLAQMLKGGVIMDVTNSQEAKIAEKAGAVAVMALERVPADIRKDGGIARMSDPKMIKEIVNSVSIPVMAKV
RIGHFVEAQILEALAIDFIDESEVLTPADEKYHIDKEKFKIPFVCGAKNLGEALRRIGEGAAMIRTKGEAGTGNVVEAVR
HIRTINREIKELSLMESEELMTAAKEMGAPYDLIKYVNENHKLPVVNFAAGGIATPADAALMMQLGCDGIFVGSGIFRSG
NPTKRAEAIVEAVTHYQDSKILARISEDLGKAMSGLDIKGLSEEEKMSNRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 8e-80 65
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-79 65
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-79 64