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Name : Halsa_2176 (Halsa_2176) Accession : YP_003995944.1 Strain : Halanaerobium hydrogeniformans sapolanicus Genome accession: NC_014654 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 2390199 - 2391866 bp Length : 1668 bp Strand : - Note : KEGG: ate:Athe_0165 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain DNA sequence : ATGCAAAAACAATGGTGGAAAGAAGCGGTAGTATATCAAATTTATCCCCGCAGTTTTAATGACAGTAATGATGATGGAAT AGGAGATTTACGAGGAATTATAGAAAAAATAGATTATCTTGATAAATTAGGGGTAGATGCAGTCTGGTTAAACCCGGTTT ATAAGTCCCCAAACGATGATAATGGCTATGATATTAGTGATTATCGAGCTATCATGGATGAATTTGGTACAATGGAAGAT TTAGAAGAATTAATAGCTCTTTTAAAAGAAAGAAATATAAAAATAATTATGGATTTAGTGATAAATCACACTTCTGATGA GCATCACTGGTATAAAGAATCAGCTAAAAGTAAAGATAATCCCTATCGTGATTATTATATCTGGAAAGATGGAAAAAATG ATGGTCCACCAAATAATTGGAAGTCTTTTTTTGGTGGTTCAACCTGGGAATATGACCAAAAAACTGACCAATATTATCTC CATTTATTTTCTAAAAAACAGCCGGATTTAAATTGGGAAAATAAAGAGCTGCGATCAGAACTTTATGATATGATAAATTG GTGGCTGGAAAAAGGAATAGATGGCTTCAGACTTGATGTTATTAACCTTATTTCTAAAAATCAGGATTTTCCAGATGGAA AAGAAAATGGTCTTTGTGGTCATGAACATTTTGCTAATGGACCAAGGGTTCATGAATTTATTCAGGAAATGGCTGAAAAG ACATACAATAATTATGATGCAATGACAGTTGGTGAGACTCCTTTTGTAGATAAAGATGAAGCAATAAAATTTGTTAAAGA AGAACGCCAGGAATTCAGTATGGTTATCCCTTTTGAACATGTAGAATTTGACCGCAAAGAGGGCTGGGAAAAAATATCTG ACTGGCAGTTAAGTGAATTAAAAGATTTAATGACTGAATGGCAGTATAAACTACAGGAAAATAATGGTTGGACAAGTCTT TATTTCTGCAATCATGACCAGCCAAGAATTGTTTCGCGTTATGGAGATGATGGTAAATACAGAAAAGAATCAGCAAAGAT GCTTGGCACATTATTGCATACTCTAAGAGGAACCCCTTTTATTTACCAGGGAGAAGAAATAGGGATGACTAATGTTAGTT TTGAAAACTTAGATGATTTTGATGATATAGAAACCAGAGGTTATTTAAATGATCTAAAGAAAAAAGGCGAGATGACAAAC GAAGAGATGCTTAAAATGGCCAATTATAGGAGTAGAGATAATGCGAGAACACCTATGCATTGGAATGACTCTAAATATGC AGGTTTTAGCAATGTAGAACCCTGGCTTCAAATGAATGATAATTATCCAGAGATTAATGTTGCCAGAGATCTAAAGTCCG ACGACTCAGTTTTTAAATATTATCAAAAGTTGATTTCACTTCGCAAAGAATATCCTGTTTTTGTTTATGGAAAATATAAA ATATTATTAGAAGATGACCAAAATATCTATACCTATATTAGAGAAGGAAAAGAAAACAATCTACTTATAATGCTTAATTT TAGTGAGCAGTTAGCTGAAGTTGATCTAGAAGATGAGCTTGAAATTCAGAATGCTGAACTGCTCATAAATAATTATAATA ATGAGCCAGAATTTAGATCAAAATCACAACTTAACCCATATGAAGCAAGGATTTACCTTTTTCAGTAA Protein sequence : MQKQWWKEAVVYQIYPRSFNDSNDDGIGDLRGIIEKIDYLDKLGVDAVWLNPVYKSPNDDNGYDISDYRAIMDEFGTMED LEELIALLKERNIKIIMDLVINHTSDEHHWYKESAKSKDNPYRDYYIWKDGKNDGPPNNWKSFFGGSTWEYDQKTDQYYL HLFSKKQPDLNWENKELRSELYDMINWWLEKGIDGFRLDVINLISKNQDFPDGKENGLCGHEHFANGPRVHEFIQEMAEK TYNNYDAMTVGETPFVDKDEAIKFVKEERQEFSMVIPFEHVEFDRKEGWEKISDWQLSELKDLMTEWQYKLQENNGWTSL YFCNHDQPRIVSRYGDDGKYRKESAKMLGTLLHTLRGTPFIYQGEEIGMTNVSFENLDDFDDIETRGYLNDLKKKGEMTN EEMLKMANYRSRDNARTPMHWNDSKYAGFSNVEPWLQMNDNYPEINVARDLKSDDSVFKYYQKLISLRKEYPVFVYGKYK ILLEDDQNIYTYIREGKENNLLIMLNFSEQLAEVDLEDELEIQNAELLINNYNNEPEFRSKSQLNPYEARIYLFQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-141 | 52 |
