Gene Information

Name : Halsa_2135 (Halsa_2135)
Accession : YP_003995904.1
Strain : Halanaerobium hydrogeniformans sapolanicus
Genome accession: NC_014654
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 2348352 - 2349098 bp
Length : 747 bp
Strand : -
Note : TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: hor:Hore_18930 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase

DNA sequence : 
ATGAATGCTTTAAAAACTGCAGCAGTAATACCGGCAAGATATGATTCCAGCCGTTTTCCTGCTAAAGCACTGGCGAAAAT
AGCCGGAAAAGAAATGGTTGTCCGGGTAATGGAAGCAGTACAAAAGTCAGAACTGATAGATGAGGTAATTGTTGCTACAG
ATGATCAGCGAATCAAAGTTGTGGTGGAAGCAAATGGTGGTCGAGCAGTGATGACCTCATCAGAGCATCAGACTGGTACA
GATAGAATAGCTGAGGCTGCAGAAGGTATTGAGGCTGATTTAATAGTCAATGTGCAGGGAGATGAGCCTTTGATAAAAAA
AGAAACTATTGCTCAGGCAATTAAACCTTTTCAAGAGGAAAAAAATCTAAAAATGAGCACATTAAAACGCAGGCTTGATC
CTAAAAAAGCTGCAAATCCAGATATAGTTAAAGTAGTTGTTGATCAAGATGATTATGCCCTTTATTTTTCCCGTTCACCA
ATTCCCTATTACAGAGATGACGAAAAAAAGGCAAAAGAATACTTTCAGCATATCGGACTTTATGTTTATAGGCGGGATTT
TTTATTGGACTATTCAGCTATGAGTTCTACAACTCTCGAAAAGGCTGAGTCTTTAGAACAACTGCGTGTTTTAGAAAGTG
GTGTTAAAATTAAGGTTATAGAAACAGAGGCAAAATTGATTGGTGTTGACCGCAAAGAGGATATTGAACTGGTAGAAAAA
GAACTTAAAAAAAGAAATAGAACCTAG

Protein sequence : 
MNALKTAAVIPARYDSSRFPAKALAKIAGKEMVVRVMEAVQKSELIDEVIVATDDQRIKVVVEANGGRAVMTSSEHQTGT
DRIAEAAEGIEADLIVNVQGDEPLIKKETIAQAIKPFQEEKNLKMSTLKRRLDPKKAANPDIVKVVVDQDDYALYFSRSP
IPYYRDDEKKAKEYFQHIGLYVYRRDFLLDYSAMSSTTLEKAESLEQLRVLESGVKIKVIETEAKLIGVDRKEDIELVEK
ELKKRNRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 4e-45 44
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 5e-45 44
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-44 43