Gene Information

Name : Halsa_1978 (Halsa_1978)
Accession : YP_003995749.1
Strain : Halanaerobium hydrogeniformans sapolanicus
Genome accession: NC_014654
Putative virulence/resistance : Resistance
Product : arsenical resistance operon trans-acting repressor ArsD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2175868 - 2176179 bp
Length : 312 bp
Strand : -
Note : PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: amt:Amet_0985 arsenical resistance operon trans-acting repressor ArsD

DNA sequence : 
TTGAGTAAAATTAAAATTAGTGTATATGAACCACCAATGTGTTGTAGTTCAGGAGTTTGTGGGCCAGATGTTGACGATGA
ATTAGTTGAATTTAGTCAAACCATAAAAAAATTAAAAGAAGAAGGTTTCACTGTAGAAAGAAATTCCATGAATCATAATC
CGTTTGCATTTCAAAACAATCAATCTGTTTTAACACAGGTAAATGATTCTGGAACTGAAAATTTACCCATTATAGAAATA
AACGGAGAAATATTAACAATAGGCGAATATGCATCATATGAAAAAATAAAATCCGCAGTTGACAAAATATAA

Protein sequence : 
MSKIKISVYEPPMCCSSGVCGPDVDDELVEFSQTIKKLKEEGFTVERNSMNHNPFAFQNNQSVLTQVNDSGTENLPIIEI
NGEILTIGEYASYEKIKSAVDKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsD YP_252027.1 hypothetical protein Not tested SCCmec Protein 8e-14 41
arsD YP_001007631.1 arsenical resistance operon trans-acting repressor Not tested YAPI Protein 5e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halsa_1978 YP_003995749.1 arsenical resistance operon trans-acting repressor ArsD BAC0033 Protein 1e-16 41
Halsa_1978 YP_003995749.1 arsenical resistance operon trans-acting repressor ArsD BAC0587 Protein 5e-17 41