|
Name : Halsa_1950 (Halsa_1950) Accession : YP_003995721.1 Strain : Halanaerobium hydrogeniformans sapolanicus Genome accession: NC_014654 Putative virulence/resistance : Virulence Product : ATPase AAA-2 domain-containing protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2141430 - 2143883 bp Length : 2454 bp Strand : - Note : KEGG: hor:Hore_00870 ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase DNA sequence : ATGTTTGCAAAATTCACAGAAAGAGCTAGAAAAGTATTAAGTATAGCTGAGCAGGAAGCACTCAAACTAAAACACAGTTA TGTAGGTACTGAGCATATATTGTATGGCTTAATTGCAGAAGGGCAGGGTATTGCTGCCCGCGCTTTAATAGATAATGGTA TTAGCAGAGATATTGTTGAAAACAAAATAGAAGATATGATAGGTAAAGGTCAAAATGAGGTTAAAGGATCTATCGGTTTG ACACCCAGGAGTAAAAAGGTATTAAATCTAGCCATGGATGAAGCTAGAAAAATGGGCCATAATTATATTGGAACTGAACA TCTTCTTTTAGGCTTGATTAGAGAAGGTGAAGGAGTAGCAGTTAGAATTTTGATGGACTTAAACAGCGATATTAAAAATA TCAAAGAAGAAGTAGTTGATCTATTAGGGGGTAAAAATGCTGTGCAAAAGAAATCCAAATCTTCTAATAGAAAAACTAAA AATCTTGATGAATACAGCCGTGATTTAACAGATATGGCAAGAGAAAACAAATTAGACCCTGTTATTGGAAGGGATAAAGA AATAAATCGGGTAATACAGGTTCTCAGCAGAAGAACAAAAAATAATCCGGTTTTAATTGGAGAGCCGGGAGTGGGAAAAA CTGCAATAATTGAAGGTTTAGCCCAAATGATAGTCAGTGAAAATGTACCTGATTTATTGTTGAATAAAAGGGTTGTTTCT CTTGACTTGAGTTCTCTTGTAGCTGGTTCTAAGTATAGAGGTGAGTTTGAACAGCGCTTAAAAGCAGTAATGAATGAGAT TATTGAAAGTGGAGAAATAATTTTATTCATTGACGAAATGCATACTTTAGTTGGAGCAGGAGCAGCTGAAGGGGCAATAG ATGCAGCTAACATTCTGAAACCAGCTTTAGCTAGAGGAGAACTACAGGCAGTTGGTGCCACAACCTTAGATGAGTACCGA AAATACATTGAAAAAGATGCTGCCTTAGAAAGAAGATTTCAGTCAGTTCTTGTTGAGGAAAATTCAGTTGAAGAAGCAAT TGATATTTTAAAGGGTCTTCGTGATCCTTATGAAGCACATCACAAAGTGGAGATTACTGACAGAGCTATAGAAGATGCTG TGGTTTTATCTCACCGGTATATATCAGATAGATTTTTACCTGATAAAGCGATTGATTTAATAGATGAGGCCGCATCTAAA GTTAGATTGAGCAATAGTACCAGACCACCCGAATTTAAAGAATTAAGCCGAAAATTAGAAGAAGCAGAAAAAGAAAAAGA AGCTGCTGTTAAAAATCAAGAGTTTGAAAAAGCAGCTAGAATGAGAGATAAAGAGAAAAAGCTTAAAAAAGAACTGGAAG AACTAAAAAATTCCTGGGAAAATGAAAAAGGTAAAGCAGAAGCTGTTGTTACTACAGAAGATATTGCTGAAATAGTCTCA AGTTGGACAGGTATACCTGTTACTAAGTTAGAAGAAGCGGAGACTGCTCGTCTTTTGAGGCTTGAAGAAGAATTACACAA AAGAGTTATTGGTCAAGATGAAGCAATTACAGCAGTTTCTGAAGCTGTAAGAAGAGCCAGAGCAGGATTAAAAGATCCTA AAAGACCAATTGGTTCTTTTATATTCTTAGGACCTACTGGAGTAGGTAAAACAGAGTTAGCTAAAACACTTGCCGAAACA ATGTTTAATGACGAAGATGCAATGATAAGAGTGGATATGTCTGAATATATGGAAAAACATTCAGTTTCTCGTCTGGTTGG TTCTCCTCCTGGCTATGTCGGTCATGATGAAGGAGGACAGCTTACAGAACCTGTCAGAAGAAGACCATATTCTGTAGTGT TGTTTGATGAAATAGAAAAAGCTCACCCAGATGTTTTTAATGTACTTCTGCAAATTTTAGAAGATGGTGTTTTAACAGAC ACTCATGGACGTAAAGTTGATTTTAAAAATACCATTGTAATAATGACATCTAATGTTGGAGCAGATTTCATTGAAAAACA ATCAAAACTTGGTTTTAAAACTGAAAATGATGAACAGTCAAATTATGAAAGCATGAAAGATAATGTAATCACTCAGCTCA GAAAGACATTTAGACCGGAGTTTTTAAATCGTCTTGATGAAATAATTGTTTTCCATGCTTTAAACAAAGAGCACATTAAA CAAATTGCAGATCTAATGCTTGATGATTTAAGAGAAAGGCTTAATGAAAAAGAAATGGAGATCGAAATTACAGAAGCTGC TAAAGATAAACTTGCAGAAGATGGCTATGATTCTGAATTCGGAGCTAGGCCTTTAAGAAGAACAATTCAACGTCAGATTG AAAACGAATTATCAATTAAGATATTAGATAAAGAAATTGGTGAAAACAGCAAAATCAAAATTGATGTTGTAGATGGAGAA TATACATTTCATACAACTAAGAAGGTTGATAAAACAGCTGTGAAAGCAGAATAG Protein sequence : MFAKFTERARKVLSIAEQEALKLKHSYVGTEHILYGLIAEGQGIAARALIDNGISRDIVENKIEDMIGKGQNEVKGSIGL TPRSKKVLNLAMDEARKMGHNYIGTEHLLLGLIREGEGVAVRILMDLNSDIKNIKEEVVDLLGGKNAVQKKSKSSNRKTK NLDEYSRDLTDMARENKLDPVIGRDKEINRVIQVLSRRTKNNPVLIGEPGVGKTAIIEGLAQMIVSENVPDLLLNKRVVS LDLSSLVAGSKYRGEFEQRLKAVMNEIIESGEIILFIDEMHTLVGAGAAEGAIDAANILKPALARGELQAVGATTLDEYR KYIEKDAALERRFQSVLVEENSVEEAIDILKGLRDPYEAHHKVEITDRAIEDAVVLSHRYISDRFLPDKAIDLIDEAASK VRLSNSTRPPEFKELSRKLEEAEKEKEAAVKNQEFEKAARMRDKEKKLKKELEELKNSWENEKGKAEAVVTTEDIAEIVS SWTGIPVTKLEEAETARLLRLEEELHKRVIGQDEAITAVSEAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAKTLAET MFNDEDAMIRVDMSEYMEKHSVSRLVGSPPGYVGHDEGGQLTEPVRRRPYSVVLFDEIEKAHPDVFNVLLQILEDGVLTD THGRKVDFKNTIVIMTSNVGADFIEKQSKLGFKTENDEQSNYESMKDNVITQLRKTFRPEFLNRLDEIIVFHALNKEHIK QIADLMLDDLRERLNEKEMEIEITEAAKDKLAEDGYDSEFGARPLRRTIQRQIENELSIKILDKEIGENSKIKIDVVDGE YTFHTTKKVDKTAVKAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Halsa_1950 | YP_003995721.1 | ATPase AAA-2 domain-containing protein | VFG0079 | Protein | 0.0 | 63 |
| Halsa_1950 | YP_003995721.1 | ATPase AAA-2 domain-containing protein | VFG0080 | Protein | 2e-148 | 53 |
