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Name : Halsa_1934 (Halsa_1934) Accession : YP_003995706.1 Strain : Halanaerobium hydrogeniformans sapolanicus Genome accession: NC_014654 Putative virulence/resistance : Unknown Product : NusG antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 2127294 - 2127824 bp Length : 531 bp Strand : - Note : TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: hor:Hore_01040 NusG antitermination factor; SMART: NGN domain-containing protein; KOW domain protein DNA sequence : ATGAGTGAAGAAAGCAAATGGTATGTTGTCCACACTTATTCTGGGCATGAAAAAAAAGTTAAGGCAAATCTTGAAAAAAG AATAGCCAGTACAGGTATGGAAGATAATATTTTTCGTATTTTAGTTCCCACAGAAGAAAAAATCGAAAAGAAAAAAGGAA AAGATGAAGTTGTTAAAAAACGGATCTTTCCGGGATATATTCTTTTACAAATGGATTTAAATGATAAATCATGGTATGTT GTTAAAAACACACCAGGGGTTATTGGCTTTGTAAGTGGTGGTAATAAACCATTACCTGTTGAAAAAGATGAAATAGATAA TATATTACGCAGCATGGGAGAAAAAGCCAAAAAAGTTTCGGTTGAATTTGAAGTTGGAGATCAAATTGTTGTAACAAGTG GACCATTTGAAGATTTTGAAGGTATAGTTAAAGAAATTCATCCTGAACAGGGTAAAGTAAAGGTTCTAGTTTCAATGTTT GGACGTGAAACACCTGTTGAGCTTGAATTTTCTCAAATTAAAACTACTTAG Protein sequence : MSEESKWYVVHTYSGHEKKVKANLEKRIASTGMEDNIFRILVPTEEKIEKKKGKDEVVKKRIFPGYILLQMDLNDKSWYV VKNTPGVIGFVSGGNKPLPVEKDEIDNILRSMGEKAKKVSVEFEVGDQIVVTSGPFEDFEGIVKEIHPEQGKVKVLVSMF GRETPVELEFSQIKTT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 5e-25 | 42 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 3e-31 | 41 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 3e-31 | 41 |
