Gene Information

Name : Halsa_1816 (Halsa_1816)
Accession : YP_003995588.1
Strain : Halanaerobium hydrogeniformans sapolanicus
Genome accession: NC_014654
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 2019031 - 2020785 bp
Length : 1755 bp
Strand : -
Note : KEGG: hor:Hore_03220 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PEP-utilising protein mobile region

DNA sequence :
ATGCGAAAAACAAAGATTGTTTGTACATTAGGACCTGCAACAAATGATAAAGAAACTATTAAGAAGGTAGTAGAGGCCGG
AATGAATGTGGCCCGATTCAATTTTTCTCATGGTAATCACGCAGAACATAAAGAGAGATTTGATTTAGTTAGGGAAGTAG
AAAAAGAAACAGGTAACCCGATTGGAATTATGCTTGATACTAAAGGCCCAGAAATAAGAACTGGTGATATGGATGGGGAT
AAAATCACTTTAGAAGAAGGTAATCAACTAATTATTTCTGGTGAAGATATAATTGGTAATTCCGAAAAGATTTCCGTATC
TTATAAAGAACTTGCTAAAGATATGAATATTGGGGATAAAATTTTAATTGATGATGGTTTAATAGAATTAGAAGTTATGG
AGATAGACGGTGATGATCTAGTTACTAAAGTATTAAATGGTGGTGAAGTTGGTTCAAGAAAAGGGGTTAATCTACCTGGA
GTTAGTGTAAATTTACCATCTTTAACTGAAAAAGATATTTCAGATATTCGCTTCGGAGTTAAAGAAGGAGTTCACTTTAT
CGCTGCATCTTTTGTTAGAAAAGCAGATGATGTTATAGAAATCAGAAAGCTTTTAGAAGAAAGTGGAAATGAAGATATTT
TTATTATCGCTAAAATAGAGAACCAGGAAGGTGTAGAAAATCTTGATGATATTTTAAAGGTTGCAGATGGAATTATGGTA
GCTAGAGGAGATTTAGGAGTAGAAATTCCTGCAGAAAAGGTTCCGATTGTCCAAAAAATGATGATTCGCAAATGTAATGA
AGCTTCTAAACCTGTTATTACAGCAACTCAAATGCTTGATTCTATGATTAGAAATCCTAGACCAACAAGAGCAGAAGCTT
CTGATGTTGCAAATGCTATTTTTGATGGAACAGATGCAACTATGCTCTCCGGAGAATCAGCAGCCGGGAAATATCCAGTT
CAATCTGTAAAAACAATGGCTCAAATTGCTATAGAAGTTGAGGAATCACAAAGTTATAAAGAAAAATTTGTTAAGGATTA
TAAGTTTAAAGCTAACTCAGTAACTGGTGCTATAAGTTTAGCTACCTGTGAAACCTCGGAAGAACTGGGAGCAGATGCCA
TAATTACTTCTACCGGTTCAGGTTTAACCGCAAGAACGGTTTCTAAATATAGACCTCAAACTCCTATTATCGCTGTAACT
CCAAGCAAAAGGGTATTACATCAGCTGGTGTTAAGCTGGGGTATTTATCCTTTACTTGCTGCTAGAAGTAGTAATACAGA
TGAAATGATGGAGAATTCAATTGATTCTGCTCTTGAGCATGGATTGATTGAAGAAGGTGATTTGGTAACAATTACTGCTG
GTACACCTGTTGGTATTTCTGGCACTACTAACCTAATCAAAATTGATGTTGTTGGTAAACCAGTTGCAGAAGGCCAGGGT
ATTGGTAAAGGTATTGTTGTTGGTAAAGCTAGAGTTGTAAGTTCAGCAGAGGAAGCAATGGAGAAAGTTGAAGAGGGAGA
TATACTTATCACCCGGATTACAGATAGAGATTATATTCCTGCTTTAAAGAAAGCTTCTGCAGTTGTTACTTATAGTGGTG
GTTTAACCTCTCACCCAGCTATAGTCGGTTTAAATATTGGTATTCCTGCTGTAGTTAATACTGGGGACCTCTCAGATTTA
TTTGAAGATGGAGAAATCATTACAGTTGATGGTGTAAGAGGTTTGGTCTACAGAGGACAGGCTCACTTAAAATAA

Protein sequence :
MRKTKIVCTLGPATNDKETIKKVVEAGMNVARFNFSHGNHAEHKERFDLVREVEKETGNPIGIMLDTKGPEIRTGDMDGD
KITLEEGNQLIISGEDIIGNSEKISVSYKELAKDMNIGDKILIDDGLIELEVMEIDGDDLVTKVLNGGEVGSRKGVNLPG
VSVNLPSLTEKDISDIRFGVKEGVHFIAASFVRKADDVIEIRKLLEESGNEDIFIIAKIENQEGVENLDDILKVADGIMV
ARGDLGVEIPAEKVPIVQKMMIRKCNEASKPVITATQMLDSMIRNPRPTRAEASDVANAIFDGTDATMLSGESAAGKYPV
QSVKTMAQIAIEVEESQSYKEKFVKDYKFKANSVTGAISLATCETSEELGADAIITSTGSGLTARTVSKYRPQTPIIAVT
PSKRVLHQLVLSWGIYPLLAARSSNTDEMMENSIDSALEHGLIEEGDLVTITAGTPVGISGTTNLIKIDVVGKPVAEGQG
IGKGIVVGKARVVSSAEEAMEKVEEGDILITRITDRDYIPALKKASAVVTYSGGLTSHPAIVGLNIGIPAVVNTGDLSDL
FEDGEIITVDGVRGLVYRGQAHLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-97 50
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-98 50
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-98 50
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 2e-97 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halsa_1816 YP_003995588.1 pyruvate kinase VFG0479 Protein 2e-98 50