Gene Information

Name : Halsa_1783 (Halsa_1783)
Accession : YP_003995556.1
Strain : Halanaerobium hydrogeniformans sapolanicus
Genome accession: NC_014654
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 1989071 - 1990180 bp
Length : 1110 bp
Strand : -
Note : TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: hor:Hore_18440 glycine betaine/L-proline ABC transporter, ATPase subunit; SMART: AAA ATPase; CBS domain containing prot

DNA sequence :
ATGATTAAACTAGAAAATCTTACTAAGTCTTATCAGGGTGAAGCAAAAGAAGCTGTCTATAACCTTAATCTTGAAATTAA
TAAAGGAGAAATTTGTGTATTTGTAGGTCCTTCAGGTTGTGGGAAAACAACAACATTAAAAATGATTAATAGATTAATTG
AACCCAGTTCTGGAAATATTTATATAAATGGAGTTAATACTGCAGAACAAAAAAAGAGTGAACTGAGACGGAAAATCGGC
TATGTTATACAGGAAATTGGACTTTTTCCTCACATGACAGTAAGAGAAAATATTGCAACTGTACCTGTCTTATTAAAATG
GGATCAAAATAAGATCAATAAACGTGTAATGGAACTGCTTAAATTAATTGATTTAGATGCAGATAATAACATGGATAAAT
ATCCACATGAATTATCAGGTGGTCAACAGCAGAGGGTTGGTGTAGCAAGAGCTATGGCAGCAGATCCACCAATTATGTTA
ATGGATGAGCCATTTGGGGCTGTAGATCCAATCACAAGAGCTGAACTACAGAATGAATTTTTAAGACTTCAGAAAAAAAT
TAATAAAACTATTTGTTTTGTTACCCATGATATAGATGAAGCTATCAAAATGGGGGATAAAATTTTAATTATGAATAAAG
GTAAAATGGTTCAATATGATAGCCCCAAAAACATATTGTTTAGTCCAAAAAATGAATTTGTGGAAGATTTTATTGGTTCA
GATCGTGCTTTAAAGGTTTTAAATTTAATTAAAGTAAATGAAATCATGGAAAGCACTTTTGAATTTGCATCACTTTCTGA
TGATTATCATAGTCTTCTCAAAAAAATAAAGAAGAAAGAAAAAAAATATTTATTAATAACTTCTGACGATAAAAAAATGG
CTGGTTATGTAACTTTAAGATCTTTAGAAAAAAACGGCAATAAAGATTGGCAGGATTATATTAAAGAAATACCTGTTATC
AAGGAAGATGCATCATTAAAAGATGTTTTTAATCTGATGTTAGAAAAAGAATTTACCATATTTCCGGTTGTGGATAAAGA
TAATAAGTTGTTGGCAAGGGTAACTTTAGATAATATTAAATCACATATTAGCTGTGAGTATCAGAAATAA

Protein sequence :
MIKLENLTKSYQGEAKEAVYNLNLEINKGEICVFVGPSGCGKTTTLKMINRLIEPSSGNIYINGVNTAEQKKSELRRKIG
YVIQEIGLFPHMTVRENIATVPVLLKWDQNKINKRVMELLKLIDLDADNNMDKYPHELSGGQQQRVGVARAMAADPPIML
MDEPFGAVDPITRAELQNEFLRLQKKINKTICFVTHDIDEAIKMGDKILIMNKGKMVQYDSPKNILFSPKNEFVEDFIGS
DRALKVLNLIKVNEIMESTFEFASLSDDYHSLLKKIKKKEKKYLLITSDDKKMAGYVTLRSLEKNGNKDWQDYIKEIPVI
KEDASLKDVFNLMLEKEFTIFPVVDKDNKLLARVTLDNIKSHISCEYQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-55 48
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 7e-56 48