Gene Information

Name : Halsa_1700 (Halsa_1700)
Accession : YP_003995477.1
Strain : Halanaerobium hydrogeniformans sapolanicus
Genome accession: NC_014654
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : -
Position : 1898729 - 1899718 bp
Length : 990 bp
Strand : -
Note : KEGG: hor:Hore_06660 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region

DNA sequence :
ATGGCTTTTAATCTAAAAGGGAGAAATTTTTTAAAGCTGAAAGATTATTCACAAAAAGAAATTGATTATTTATTAACTTT
ATCAGCAGAACTTAAATCAAAAAAAAGGACAGGTATTAAAGGTGATTTATTGACCGGGAAAAATATTGCTTTGATTTTTG
AGAAACCATCTACTAGAACTCGTTGTGCATTTGCTGTTGCAGCTAAAGATGAAGGTGGAAGTACTGAATATCTGGGTAAG
AATGATATACAATTAGGAAAAAAAGAAACTGTTGCTGACACTGCTAGAGTTTTAGGCAGAATGTTTGATGGGATAGAGTT
CAGAGGATATTCGCATCAAACCGTAGAAATTTTAGGAGAGCATGCAGGAGTTCCAGTCTGGAATGGTTTAACAGATCTTT
TTCATCCTACACAAATTTTAGCAGATTTTTTAACTATCAAAGAAAACTTTTCTAAACTAAAAGGGATAAATCTTGTCTAT
ACCGGTGATGGAAGAAATAATATGGCTAATTCTTTAATGGTCGGTTCTGCCATAATGGGAATTAATTATACTGTTGTAGC
TCCTGAGAAATTATGGCCTGAAAAAGATTTGCTTGCGGAATGTGAGGCTCTAGCTGAAAAGTCGGGTTCTAAAATTGAAC
TGACAGCTGATCCGGTTGAGGGAGTAAAAAATGCCGATGTTATATATACTGATGTCTGGGTGTCTATGGGAGAAGAGCAA
AAGTTTGCAGAACGGATTGAACTTTTAAAAGATTATCAAGTTAATATGGATATGATCAACAATACTGGAAACAATGAAGT
TATACTTTTGCATTGTTTACCAGCTTATCATAACAGTGAGACTGAAAATGGACAGAAGATATTAGATGAATTTGGGATTA
CAGAAATGGAAGTTAGTGATGAAGTATTTGAAAGTAAATATTCTAAAGTTTTTGACCAGGCAGAAAATCGAATGCATACA
ATAAAAGCTGTTATGACAGCAACAATTTAG

Protein sequence :
MAFNLKGRNFLKLKDYSQKEIDYLLTLSAELKSKKRTGIKGDLLTGKNIALIFEKPSTRTRCAFAVAAKDEGGSTEYLGK
NDIQLGKKETVADTARVLGRMFDGIEFRGYSHQTVEILGEHAGVPVWNGLTDLFHPTQILADFLTIKENFSKLKGINLVY
TGDGRNNMANSLMVGSAIMGINYTVVAPEKLWPEKDLLAECEALAEKSGSKIELTADPVEGVKNADVIYTDVWVSMGEEQ
KFAERIELLKDYQVNMDMINNTGNNEVILLHCLPAYHNSETENGQKILDEFGITEMEVSDEVFESKYSKVFDQAENRMHT
IKAVMTATI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-92 60
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-91 60
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-91 60
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-91 60
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 7e-92 60
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 8e-92 60
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 2e-86 57