Gene Information

Name : Halsa_1566 (Halsa_1566)
Accession : YP_003995345.1
Strain : Halanaerobium hydrogeniformans sapolanicus
Genome accession: NC_014654
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1746513 - 1748570 bp
Length : 2058 bp
Strand : -
Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: hor:Hore_10120 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase dom

DNA sequence :
ATGAATGGTAAATTGTTAGATGAAGTTCAATATATAAAAGGTGTAGGTCCTAAATGGGCAAAAAAACTTGCTAAGTTAAA
CATTGAAACAGTTTATGATCTGCTTTATTATTTCCCCAGGGAATATAAAGATCGCAGTCAAATATCTTCAATAAGGTATG
CTCAAATCGGTGAAGAAGTTACGATTAAAGCAGAAGTAATTAAAGTTGAATATAAAAAAATCAGAAAAAACTTTGATCTT
CTCAAAGTAACTTTTTCTGATGATACTGATGTGCTCAATGGAATCTGGTATAATCAGGGTTATTTGCGTGATATTTTTGA
AGAGGGAAAATTTTATCTTTTGAGTGGGAAAATAAATGAAAAAACATGGAAAAAATACAAACGTAAAGAAATAGATAATC
CAGTATTTGAAAAAATAGGCGATAATTCTTCCGTTTTAAATACAGGAAGAATTGTGCCTATTTATTCTTTAACTGAAGGT
TTAACCCAGCGTCGTCTCAGAAGAGTTATGGCTAATGCTTTAAAAAAATATAGCTCATATTTAGATGATAAATTGCCAGA
TTTTTTACTAAAAAAATATAACCTTCCTGGCCTAAAAACTTCAATTTTGGGTATGCATTTTCCCAAAAGTGATAAACATC
AAGAAGTTTCTCGTAAACGCCTGGCTTTTGAGGAATTCTTTTATTTCCAACTTTATGCTTTAGATAAAAAGCAAAAGAAT
AATATAGAAGAAGGAATTCAGCATGAAGCTGTGCCAGAAATTGAAGCAAGATTTTTATCTGAGCTAGATTTTGAGTTAAC
TACAGCTCAAAAAAGAGTTTGGAAAGAAATTAGCAAAGATATGGAAAGCAAAGAAGCGATGAGCAGACTACTACAGGGTG
ATGTAGGTTCTGGTAAAACTATAATAGCAGCTCTTTCTTTTTTAGAAAGTTTAGCCAATGATTATCAGGGAGTATTTATG
GCGCCAACCGAAATATTAGCTGAACAGCACTACCTGAATTTTTTGGAGCTCTTTAATAATTTTGATTATGAGATTACTCT
GCTTACTGGAAGTTTAAAAAATCCAGAGCGTAGAGAAATTGAAGAAAAAATTAGCGCTGGTGATATTGACCTAATAATTG
GTACTCATGCTCTTTTTCAAGAAGGTATTGAATATCAAAAATTAGGATTGGTAGTGATTGATGAACAGCATCGTTTTGGT
GTGGAGCAGAGACATAGTTTAAAAGAAAAGGGAGATAATCCTGATCTATTAATTATGACTGCTACTCCTATTCCACGTTC
TATGGCCATGTTGGTTTATGGTGATTTAGACCTTTCTGTAATTGATGAAATGCCTCCTGGTCGAAAAAGAACTGCTACTT
TTTGGCGACGGGAAAACAGGCGAAAAAAGATTTATTCATTTCTTAAAGAAAAAATTAAAGAAGGTAGACAGGCTTATATT
GTCTGCCCTTTAATTGAAGTATCAGCAGAAATGCCTGATTTGATTTCAGCAGAAGAATTGTATGAAAAATTAAAAAATGG
ATTTTTTGCAGATTTCAGTTTAGCTCTTTTACATAGTGGTATAAAAGAAGAGGAAAAAAAAGAGATCATGCTACAATTTC
GGGCAGGAAAGATTGATATATTAATTGCCACAACTGTAATAGAAGTTGGGGTAGATGTTAGTAATGCAAGTTTAATGATA
ATTGAAAATGCAGAAAGATTTGGGCTTGCTCAATTACATCAGTTGAGAGGTAGAGTTGGTCGTGGTCGTGATCAGGCTTA
TTGTATTTTAATTTCAAATCCTCCTGGAGAAGAAGCAGAAAAAAGACTGGAAATAATGACAAAAAGTAGTGATGGATTTT
ATATTGCCGAAGAAGATCTTAAGATGCGTGGACCTGGAGAGTTTTTTGGCACCAGACAACATGGGCTTGATGATCTTAAA
GTAGGTAGTTTAACTGAAGACCAGGCTTTATTGGAAAAAGCAAGATCAGAGGCAATAGCTTTAGTTGAAATTGATAATTG
GAGAGAAAAATATGAAGATCTACTGCAGATTATAGAAAAAATAGATTTAAAAATATAG

Protein sequence :
MNGKLLDEVQYIKGVGPKWAKKLAKLNIETVYDLLYYFPREYKDRSQISSIRYAQIGEEVTIKAEVIKVEYKKIRKNFDL
LKVTFSDDTDVLNGIWYNQGYLRDIFEEGKFYLLSGKINEKTWKKYKRKEIDNPVFEKIGDNSSVLNTGRIVPIYSLTEG
LTQRRLRRVMANALKKYSSYLDDKLPDFLLKKYNLPGLKTSILGMHFPKSDKHQEVSRKRLAFEEFFYFQLYALDKKQKN
NIEEGIQHEAVPEIEARFLSELDFELTTAQKRVWKEISKDMESKEAMSRLLQGDVGSGKTIIAALSFLESLANDYQGVFM
APTEILAEQHYLNFLELFNNFDYEITLLTGSLKNPERREIEEKISAGDIDLIIGTHALFQEGIEYQKLGLVVIDEQHRFG
VEQRHSLKEKGDNPDLLIMTATPIPRSMAMLVYGDLDLSVIDEMPPGRKRTATFWRRENRRKKIYSFLKEKIKEGRQAYI
VCPLIEVSAEMPDLISAEELYEKLKNGFFADFSLALLHSGIKEEEKKEIMLQFRAGKIDILIATTVIEVGVDVSNASLMI
IENAERFGLAQLHQLRGRVGRGRDQAYCILISNPPGEEAEKRLEIMTKSSDGFYIAEEDLKMRGPGEFFGTRQHGLDDLK
VGSLTEDQALLEKARSEAIALVEIDNWREKYEDLLQIIEKIDLKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 4e-94 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halsa_1566 YP_003995345.1 ATP-dependent DNA helicase RecG BAC0356 Protein 3e-102 41