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Name : Halsa_1448 (Halsa_1448) Accession : YP_003995229.1 Strain : Halanaerobium hydrogeniformans sapolanicus Genome accession: NC_014654 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1614469 - 1616145 bp Length : 1677 bp Strand : - Note : PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: hor:Hore_05970 Tfp pilus assembly protein PilB DNA sequence : ATGAATCCAAAACACAAACAGAGAATTGGAGATCTTCTTTTAGAATGGGGATATATAACAAGAGAACAGCTGGAAGATGC ACTTTCTCTCCAGGATGAAATGGGGATGAAATTAGGCCAGGTGCTGACAGAGTTAGGTTATATTAAAGAAGACGAACTGG TTGATGTACTGGAAATACAGCTGGGAATCCCCAGAGTAGATCTTTCAAATTATATTTTAAATACTCAGTTATCTCAATAT CTATCAGAAAATATTGCTTCACGGCATAATGCAGTTCCTTATGCTGTAGAGGATGGTGTTTTAAAGGTTGCCCTTGAAGA CCCAACCGATCTGGTAGCAATAGAAAATATTGAGGTTAATTCCGGGATGAAGGTCCATATCTCGATTGCTCCTCACTCTG AGATCATGGATTCTTTTAACCAGATCTATACCCTGGTTGATGGAGATACTTCTGAGATTTTTGACAGTTTAAATAAATAT GATGAGATGAACACAGAGCCCGAAATAGATCAGTTAAGGCAGATGGTAGAAGATGCACCAATCGTTAGATTGACAAACCT GATCATCACCCAGGCCATTCAAAATCAGGCAAGTGATATTCATATTGAACCTTTAAATAATATTGTCAGGGTTCGCTACA GGGTAGATGGTGTTTTACATGAGGAGATGTCGATCCCAAAGCATTCTCAGGCAGCACTTATCTCCCGTTTAAAGATCTTA GCTGACCTTGATATTACCAAAAGGAGAATACCTCAGGATGGTAGGGTTCAGATGACCTTTAGAAATATGCAGATCGATAT GCGTGTTTCTACCCTGCCGACAATCCACGGAGAAAAGGTTGTTATCAGGCTTTTAATGAGGGATAATACTCTTTTAAATA TTAATAAGCTCGGGTTTAGAGAAGAAAATCAGCAGCGTTTTGAAAGGTTAATTAAAAGACCATATGGAATATTACTGGCA ACTGGTCCTACCGGTAGTGGTAAATCAACTACCCTTTTTGCAGCTTTAAATAGGATCAATACTCCAACTAAAAACATCGT TACAATTGAGGATCCAGTTGAATACCAGATAGAAGGTATAAATCAGGTGCAGGCAAATGTAAAAGCAGGTTTGACCTTTG CTAAAACTTTAAGGTCGATCTTAAGACAGGATCCCGATATCGTAATGGTCGGTGAGATTAGAGATGAAGAAACAGCAGAA ATTGCTATTAGAGCAGCTTTAACCGGTCACCTTGTTTTAAGTACCCTGCATACAAATGATGCAGTAAGTGCAATTACAAG ATTAACAGATATGGGTATCCCCGGTTATTTAGTTGGCTCAACCGTTATCGGTGTTATTGCCCAGCGGCTGGTAAGAACAC TCTGTCCCAGCTGTAAAGAAGAATATGAAATCGGGGCAGAAGAAAGAAAGTTCCTCGATAATGATACCCAAACCCTCTGG CGACCTTCTAGCGGTAAATGCGAAAAATGTGTAGATGGCTATAAAGGAAGGATTGCTATTCAGGAGGTTGTAGAAATTAC TCCAGAGTTAGAGGAGCTGATTGCCGAAGGGGCGAATGAGCCTCAGATGAAAAGATATGTTAGAGATCAGGGTATGACAG GTTTGTTAGATGATGGTAAGGCCAAATTAAAACAGGGTCTGACAAGTTATAAGGAACTGGTTAGTGTAATTCATTAA Protein sequence : MNPKHKQRIGDLLLEWGYITREQLEDALSLQDEMGMKLGQVLTELGYIKEDELVDVLEIQLGIPRVDLSNYILNTQLSQY LSENIASRHNAVPYAVEDGVLKVALEDPTDLVAIENIEVNSGMKVHISIAPHSEIMDSFNQIYTLVDGDTSEIFDSLNKY DEMNTEPEIDQLRQMVEDAPIVRLTNLIITQAIQNQASDIHIEPLNNIVRVRYRVDGVLHEEMSIPKHSQAALISRLKIL ADLDITKRRIPQDGRVQMTFRNMQIDMRVSTLPTIHGEKVVIRLLMRDNTLLNINKLGFREENQQRFERLIKRPYGILLA TGPTGSGKSTTLFAALNRINTPTKNIVTIEDPVEYQIEGINQVQANVKAGLTFAKTLRSILRQDPDIVMVGEIRDEETAE IAIRAALTGHLVLSTLHTNDAVSAITRLTDMGIPGYLVGSTVIGVIAQRLVRTLCPSCKEEYEIGAEERKFLDNDTQTLW RPSSGKCEKCVDGYKGRIAIQEVVEITPELEELIAEGANEPQMKRYVRDQGMTGLLDDGKAKLKQGLTSYKELVSVIH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 6e-91 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-91 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Halsa_1448 | YP_003995229.1 | type II secretion system protein E | VFG0233 | Protein | 9e-77 | 46 |
| Halsa_1448 | YP_003995229.1 | type II secretion system protein E | VFG2048 | Protein | 1e-91 | 44 |
| Halsa_1448 | YP_003995229.1 | type II secretion system protein E | VFG0182 | Protein | 2e-93 | 43 |
