|
Name : Halsa_1261 (Halsa_1261) Accession : YP_003995043.1 Strain : Halanaerobium hydrogeniformans sapolanicus Genome accession: NC_014654 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 1420021 - 1421064 bp Length : 1044 bp Strand : + Note : PFAM: Integrase catalytic region; KEGG: tit:Thit_2281 integrase catalytic region DNA sequence : ATGGCTCATACTAAAGATAATACCACAACTCAAAGAACTTTTAAACATCTTTCTTCTTATGAAAGAGGTAAAATTGCTGC TCTTCTGCAAGAAGGATACTCTCAAAGAAAGATTGCTGAAAAGCTAGGCAGAAATCACAGCACTATTAATCGTGAAATTA AAAGAGGTACTACAACTCAACTTAACTATGATCTGTCTACTTATGAACAGTATTTCCCTGAAACTGGTCAAGCTGTCTTT GAGAAAAATCGTTCTCACTGCGGTAATAAATCTAAATTGCTTAAAGTGGAATCTTTTCTACAACATGCTGAAAAAATGAT CTTGAAAAATGATTGGTCTCCAGATGTTGTTGTTGGACACGCTCTAAAAAATAATGAATTTACTAAAGATGAAATGGTAT CCACTAAAACTCTCTATAATTATATAGATCAAAATTTATTAGATGTTAAAAATATTGATCTTCAACTTAAAGTTCGCAGA AAACAAAGAGATCCTAATAAAAGAAAGCATAAAAGACTTCAGGGTAAAAGTATTGAAGAAAGACCAGAAACAGTTGATGA TCGAAAAGAATTCGGCCACTGGGAAATTGATACCGTCAGAGGTACTAGAACTAAAGATAATGTCCTTTTAACTATTACTG AAAGATCCACTCGTCAGCATTTAATTAGACTCTTAGAAGATAAGAGCTCTGCTGCTGTAGATCAAGCAATTAAGAAACTT AAAGTTCAATTTTCTAATGTTTTTAAAAAGGTATTTAAAACCATTACAGCTGATAATGGAACTGAATTTGCTAATTTATA TAATCATGATGTTGATGTTTACTATGCTCATCCTTATTCAGCCTGGGAAAGAGGCACTAATGAAAGACATAATGGTCTCA TTAGAAGATTCATTCCTAAAGGAGAACAAATAAGCAACTATACAGAAAAACAGATTCGGAGAATACAAAATTGGTGTAAT AATTATCCAAGAAAATTATTGGATTATTCTACTCCAAATGAATTATTCCAAAAAGAACTTCAAGCTATTATTAACCCTGT TTAA Protein sequence : MAHTKDNTTTQRTFKHLSSYERGKIAALLQEGYSQRKIAEKLGRNHSTINREIKRGTTTQLNYDLSTYEQYFPETGQAVF EKNRSHCGNKSKLLKVESFLQHAEKMILKNDWSPDVVVGHALKNNEFTKDEMVSTKTLYNYIDQNLLDVKNIDLQLKVRR KQRDPNKRKHKRLQGKSIEERPETVDDRKEFGHWEIDTVRGTRTKDNVLLTITERSTRQHLIRLLEDKSSAAVDQAIKKL KVQFSNVFKKVFKTITADNGTEFANLYNHDVDVYYAHPYSAWERGTNERHNGLIRRFIPKGEQISNYTEKQIRRIQNWCN NYPRKLLDYSTPNELFQKELQAIINPV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0648 | YP_697974.1 | IS1470, transposase | Not tested | Not named | Protein | 9e-71 | 47 |
| CPR_0383 | YP_697712.1 | IS1470, transposase | Not tested | Not named | Protein | 8e-71 | 47 |
| CPR_0628 | YP_697955.1 | IS1470, transposase | Not tested | Not named | Protein | 5e-71 | 47 |
| CPR_0379 | YP_697708.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-71 | 47 |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-70 | 46 |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-71 | 46 |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-71 | 46 |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-71 | 46 |
| CPR_1088 | YP_698410.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-70 | 46 |
| CPR_0659 | YP_697986.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-47 | 43 |
