|
Name : Halsa_1166 (Halsa_1166) Accession : YP_003994951.1 Strain : Halanaerobium hydrogeniformans sapolanicus Genome accession: NC_014654 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 1315326 - 1316375 bp Length : 1050 bp Strand : - Note : PFAM: Integrase catalytic region; KEGG: cpr:CPR_0383 IS1470, transposase DNA sequence : ATGGACTACTTATATGATACACCAAATTCTCGAAAAAATAAACACCTTAATGCTTATGATCGCGGTCAAATTGCTTTATT ACATTCAGAAGGAATGTCACCTTATGCAATTGGTAAACGCTTAGGTAGAGCTTCAAATACAATTAGAAACGAGTTGAAAC GTGGTACAGTTTCTCAAATAAAGGCCAATAAAAAGGTTGATATTTATTTCCCTGATGTTGGTCAAAGAGTTTATGAAAAT AATCGTAAAAATTGCGGACCTAAGTTTAAACTCCTAGAGTGCGAAGATTTCATAGAACATGTTTTAGATAAATTTTACAA CTCAGATCATTCAATTGATTCTATTTGTGGATCAGCTCAGGTGCATAATAAATTTCCAAATTCAAAGATGGTTTGCACCA AAACTCTCTATAATTACATAGATGCTGGACTACTTAAGATTAAAAATATTGATCTACCATTGAAATTAAAGCGTTCTACA AAACCAAAACGTATTAAGCAGAATAAAAAGAAACTGGGTACCAGCATTGATGAACGCCCTGAAAGCGTTAATGATCGCAG CGAATTTGGCCACTGGGAAATTGATACTATTATTGGTAAAAAGACTAAAGATGAAGCAGCACTACTTACTATGACAGAAC GTACAACTCGCTCACAAATTATTCGCAAAATTGATGACAAAACATCTTGTTCTGTTCAGGAAGCTATGACAAAGCTAATC AAAGAAACTGGAGATCTTTTTTCTACAGTCTTTAAAAGCATTACCAGTGACAATGGTTCTGAATTCTCAGAGCTAGCCAG TGTAGAAGAAATAGTTGGCACTAAAATTTATTATACTCATCCCTATTCAGCCTGGGAAAGAGGAACAAATGAACGTCACA ATGGCTTGATAAGAAGGTTTATACCTAAAGGTAGAAGTATAAATGAATTTTCAATTGAAGCTATTGCTAGAGTTCAAAAT TGGTGTAATACTTTACCTAGAAAAATATTAGGATATTTAACTCCTGATGAAGCTTTTGAAGACCAACTAAAACTAATTCT ATACAATTAA Protein sequence : MDYLYDTPNSRKNKHLNAYDRGQIALLHSEGMSPYAIGKRLGRASNTIRNELKRGTVSQIKANKKVDIYFPDVGQRVYEN NRKNCGPKFKLLECEDFIEHVLDKFYNSDHSIDSICGSAQVHNKFPNSKMVCTKTLYNYIDAGLLKIKNIDLPLKLKRST KPKRIKQNKKKLGTSIDERPESVNDRSEFGHWEIDTIIGKKTKDEAALLTMTERTTRSQIIRKIDDKTSCSVQEAMTKLI KETGDLFSTVFKSITSDNGSEFSELASVEEIVGTKIYYTHPYSAWERGTNERHNGLIRRFIPKGRSINEFSIEAIARVQN WCNTLPRKILGYLTPDEAFEDQLKLILYN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_0321 | YP_697650.1 | IS1470, transposase | Not tested | Not named | Protein | 1e-84 | 52 |
| CPR_0628 | YP_697955.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-85 | 52 |
| CPR_1078 | YP_698400.1 | IS1470, transposase | Not tested | Not named | Protein | 5e-85 | 52 |
| CPR_0383 | YP_697712.1 | IS1470, transposase | Not tested | Not named | Protein | 5e-85 | 52 |
| CPR_0379 | YP_697708.1 | IS1470, transposase | Not tested | Not named | Protein | 4e-85 | 52 |
| CPR_0314 | YP_697643.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-85 | 52 |
| CPR_0967 | YP_698290.1 | IS1470, transposase | Not tested | Not named | Protein | 3e-85 | 52 |
| CPR_0648 | YP_697974.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-85 | 52 |
| CPR_1088 | YP_698410.1 | IS1470, transposase | Not tested | Not named | Protein | 6e-84 | 52 |
| CPR_0659 | YP_697986.1 | IS1470, transposase | Not tested | Not named | Protein | 2e-59 | 50 |
