Gene Information

Name : Halsa_1150 (Halsa_1150)
Accession : YP_003994936.1
Strain : Halanaerobium hydrogeniformans sapolanicus
Genome accession: NC_014654
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1296983 - 1298128 bp
Length : 1146 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: hor:Hore_08530 diaminohydroxyphosphoribosylaminopyrimidine deaminase;5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-bin

DNA sequence :
ATGGAAGAAAAGTTTTCAATTACTGACATTAGATATATGGCAAGAGCACTTGAAATTGCTAAAAAGGGTGAAGGTAGTGC
CTCTCCAAACCCTATGGTAGGAGCTGTTTTAGTAAAAAATGGAGAGATAATCGGTGAGGGATATCATAAATTTTATGGCG
GTCCTCATGCAGAGGTTTATGCACTAAAAGAAGCGGGTCAAAATGCCAATAATGCTGATATTTATTTAACTTTAGAACCC
TGCAGTCATTATGGAAAAACACCCCCCTGTGCGGATAAATTAATTAAATCAGGAATAAAAAGAGCAGTTATTGCTATGGT
TGATCCAAATCCAGAGGTCTCAGGTAGAGGTATAGAACTATTAAAAGAAGCTGGAATCGAGGTCGAGTTAGGCTTGATGG
CCGAGAAAGCTAAAGATTTAAATGAAGTATTTTTAAAGTATATTACAAGTGATTATCCTTATGTATATTTAAAAAAGGCT
CAGACCTTAGATGGTTTTATTGCAAGCTCTACCGGTCATTCTAAATGGATAACAAATGAAAAAGCTCGTTTAGAAGGACA
TAAATTAAGACATAAAGTAGATGCGATAATGGTTGGGATAGGAACTGTTTTAGCTGATGATCCATCTTTAACAACAAGAT
TAGAAGAACAGGGAGGTATTGATAGTTTAAGGGTTATACTTGATCCGGAACTGGATATGCCCTTAGATGCTAAAATTATT
AATCAAGAATCTACTGCTTCAACCCTGTTGATTGCATCAGAGGCGAGTTTAGAAAGCAATTCAGCAGCTTTAATGGAGAA
AAAAGAAAAACTTTTAGCTAAAAATAATGTAGATATTATTGCTGTCCCTTTAGAAGAAGAAGGTTTTTTAAATTTAGATT
TTATTTTAAGACAACTTCATGATTTAAATATCAGCAGTATTTTGCTTGAAGGTGGAGCTAAATTAAGTTACTCATTTTTA
AATAAAGGTTTAATTGATAAATTTTATTATTTTATCGCTCCTAAAATTTATGGTGGTGATGATGGTATTTCTTCATTCTG
TGGTCAGGGACCTAAATTAATGTCAGATTCAAAAGATATTAAAATTTTAGATAGAAGATTTTTAGGTGATAATATCCTAT
TAATTGGTGAATTACAAAACAAATAA

Protein sequence :
MEEKFSITDIRYMARALEIAKKGEGSASPNPMVGAVLVKNGEIIGEGYHKFYGGPHAEVYALKEAGQNANNADIYLTLEP
CSHYGKTPPCADKLIKSGIKRAVIAMVDPNPEVSGRGIELLKEAGIEVELGLMAEKAKDLNEVFLKYITSDYPYVYLKKA
QTLDGFIASSTGHSKWITNEKARLEGHKLRHKVDAIMVGIGTVLADDPSLTTRLEEQGGIDSLRVILDPELDMPLDAKII
NQESTASTLLIASEASLESNSAALMEKKEKLLAKNNVDIIAVPLEEEGFLNLDFILRQLHDLNISSILLEGGAKLSYSFL
NKGLIDKFYYFIAPKIYGGDDGISSFCGQGPKLMSDSKDIKILDRRFLGDNILLIGELQNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 5e-47 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 5e-47 41