Gene Information

Name : Halsa_1072 (Halsa_1072)
Accession : YP_003994862.1
Strain : Halanaerobium hydrogeniformans sapolanicus
Genome accession: NC_014654
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1214835 - 1215107 bp
Length : 273 bp
Strand : +
Note : PFAM: transposase IS3/IS911 family protein; KEGG: mcl:MCCL_plsB0020 transposase

DNA sequence :
ATGCCTACAAAATATCCTGAAGAAATCAAAAGAAAAGTTGTTGCTCTGGCCAATAATGGTAAAAATCAAACTGAAATACT
CAATGAATATGGAATGGCAAGGTCCACACTTCATAAATGGATAAAAGACTATAATAACTCAGGTTCATTCAGCGCTAAAG
ATAATAGATCTGATAAAGAAAAAGAATTAATTAAATTACAAAAAGAAAACAAGCAGTTAAAAATGGAGAATGATATTTTA
AAGCAAGCGGCGCTGATAATGGGACGAAAGTAG

Protein sequence :
MPTKYPEEIKRKVVALANNGKNQTEILNEYGMARSTLHKWIKDYNNSGSFSAKDNRSDKEKELIKLQKENKQLKMENDIL
KQAALIMGRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0081 YP_039548.1 transposase Not tested Type-II SCCmec Protein 5e-20 61
unnamed BAC67553.1 hypothetical protein Not tested Type-IVc SCCmec Protein 3e-20 61
SAR0416 YP_039869.1 transposase Not tested vSa¥á Protein 2e-12 49
SACOL0464 YP_185354.1 IS3 family transposase Not tested vSa¥á Protein 1e-10 45
tnp YP_001331418.1 transposase Not tested vSa¥á Protein 1e-10 45
SAV0418 NP_370942.1 transposase Not tested vSa¥á Protein 9e-11 45
SA0379 NP_373628.1 transposase Not tested vSa¥á Protein 9e-11 45