Gene Information

Name : Calhy_0839 (Calhy_0839)
Accession : YP_003991944.1
Strain : Caldicellulosiruptor hydrothermalis 108
Genome accession: NC_014652
Putative virulence/resistance : Resistance
Product : protein-tyrosine phosphatase, low molecular weight
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 881838 - 882251 bp
Length : 414 bp
Strand : -
Note : KEGG: ate:Athe_1932 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight

DNA sequence :
ATGAAACCAAGAGTTGCTTTTGTATGTGTTGGCAATTCATGTCGAAGCCAGATGGCAGAAGGTTTTGCCAAACACTATGG
AAAAGATTTGATTGAAGTATACAGTGCAGGAACAGATATCGCAAAAGAGGTAAACCCGCTTGCCATTGAAGTCATGAAAG
AGGCTGGAATTGATATATCTTCACATTTCCCAAAGACAATATTTGACATTCCAAAAGAGGTAGACTTTTTAATCACAATG
GGATGTGGTGTTGAGTGCCCGTTTATCCCATGCAAGGTCAAAGAGGATTGGGGGCTACCTGACCCAGCAGGAAAACCCAT
TGAAGAATTTAGAAAAGTAAGAGATGAAATAGAAAAAAAGGTTTTAGAGCTTCTTGAAAGAATTAAAAAAGAATATTATG
GGGAGGAAAAATAA

Protein sequence :
MKPRVAFVCVGNSCRSQMAEGFAKHYGKDLIEVYSAGTDIAKEVNPLAIEVMKEAGIDISSHFPKTIFDIPKEVDFLITM
GCGVECPFIPCKVKEDWGLPDPAGKPIEEFRKVRDEIEKKVLELLERIKKEYYGEEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 6e-20 52
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 1e-18 51
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 2e-18 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calhy_0839 YP_003991944.1 protein-tyrosine phosphatase, low molecular weight BAC0032 Protein 3e-18 52
Calhy_0839 YP_003991944.1 protein-tyrosine phosphatase, low molecular weight BAC0580 Protein 1e-18 51
Calhy_0839 YP_003991944.1 protein-tyrosine phosphatase, low molecular weight BAC0581 Protein 3e-16 48
Calhy_0839 YP_003991944.1 protein-tyrosine phosphatase, low molecular weight BAC0586 Protein 9e-17 44