Gene Information

Name : Calhy_0838 (Calhy_0838)
Accession : YP_003991943.1
Strain : Caldicellulosiruptor hydrothermalis 108
Genome accession: NC_014652
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0798
EC number : -
Position : 880789 - 881835 bp
Length : 1047 bp
Strand : -
Note : KEGG: ate:Athe_1933 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter

DNA sequence :
ATGGAGCAGAAAAAAGGCTTGTCGTTTTTAGACAGATTTTTGACAGTTTGGATTTTGCTTGCTATGATTGTAGGTGTTCT
GATAGGGTACTTTTTCCCAAACTTTGCAAATGTGCTAAATAGGCTTAGCATTGGAACAACATCAATTCCAATTGCTATTG
GGTTAATTCTGATGATGTATCCTCCTCTTGCAAAAGTAAGATATGAAGAGATAGGAAAGACAAAAGCAGGTAAAAAACCT
TTTGGAATTGCAATTTTATACAACTGGTTTATAGGACCTGTTGTCATGTTTTTGCTTGCCATCTTGCTTTTGAGAGATTA
TCCGCATTATATGATAGGAGTAATATTGGTAGGTTTGGCTCGATGCATTGCGATGGTTCTTGTGTGGAATGACCTTGCAG
ATGGTGATAGAGATTTTGTTGCGGGGCTCGTTGCTCTCAACGCAATCTGGCAGGTTCTCACTTATTCAGTACTTGCATAT
GTGTTTATAAAGATACTTCCTCCACTTTTTGGAATAAGCACATCTGCAATTGCTCTGCATATTTCAATGAAAGAAATAGC
AATTTCGGTGTTTATTTACCTTGGCATTCCTTTTATAGCGGGGGTATTGACAAGGATTTTACTTGTCAGGAAAAAAGGCA
GAGAATGGTACGAAAAGAATTTTGTGCCCAAGATAAGTCCAATAACCTTGGTAGCACTGCTTTTCACAGTCATTGTGATG
TTCTCGTTAAAAGGAAAATACATTGTCACTTTGCCACTTCATGTGTTGAGGATTGCAATACCACTTTCGTTGTATTTTGT
TATAATGTTTTTGATAACATTCTTTACATCATATAAAAGAAAATATCCTTATCCTGAGAGTGCAACTGTTGGTCTGACAG
CAGCAAGCAACGACTTTGAACTTGCAATTGCAGTTGCTGTTGCAACCTTTGGATTGGGTTCAGGTGAGGCCTTTGCAACA
GTTATTGGTCCTCTGATTGAGGTTCCCGTTATGCTTCTTTTGGTAAACGTTGCTCTGTTTTTAAAAAAGAAACTTTATGG
TTATTAA

Protein sequence :
MEQKKGLSFLDRFLTVWILLAMIVGVLIGYFFPNFANVLNRLSIGTTSIPIAIGLILMMYPPLAKVRYEEIGKTKAGKKP
FGIAILYNWFIGPVVMFLLAILLLRDYPHYMIGVILVGLARCIAMVLVWNDLADGDRDFVAGLVALNAIWQVLTYSVLAY
VFIKILPPLFGISTSAIALHISMKEIAISVFIYLGIPFIAGVLTRILLVRKKGREWYEKNFVPKISPITLVALLFTVIVM
FSLKGKYIVTLPLHVLRIAIPLSLYFVIMFLITFFTSYKRKYPYPESATVGLTAASNDFELAIAVAVATFGLGSGEAFAT
VIGPLIEVPVMLLLVNVALFLKKKLYGY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 2e-89 55
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 2e-89 55
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 1e-68 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calhy_0838 YP_003991943.1 arsenical-resistance protein BAC0573 Protein 3e-97 60
Calhy_0838 YP_003991943.1 arsenical-resistance protein BAC0004 Protein 1e-79 51