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Name : Calhy_0648 (Calhy_0648) Accession : YP_003991758.1 Strain : Caldicellulosiruptor hydrothermalis 108 Genome accession: NC_014652 Putative virulence/resistance : Unknown Product : preprotein translocase, seca subunit Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 696583 - 699129 bp Length : 2547 bp Strand : + Note : KEGG: ate:Athe_2104 preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; helicase domain protein; SecA Wing and Scaffold; SEC-C motif domain protein DNA sequence : ATGTTAAAGATAATTGAAAAACTTATAGGCAGCTACAGTGAAAGAGAGATAAAAAAAATCTTGCCAATAGTTGACAAGAT AGAATCACTTGCATCGGAATATGAGAGGTTAACAGATGCAGAGCTGAGACAAAAGACAGATATATTCAAACAAAGGCTAA AAAATGGCGAAACTTTGGACGATATCCTGCCAGAAGCGTTTGCAGCTGTGAGAGAAGCTGCTTGGCGGACTTTGAAGATG CGCCATTTTAGAGTCCAGCTTATAGGCGGCATAGTTCTGCACCAGGGCAGGATTGCAGAGATGAAAACCGGTGAAGGTAA AACCCTTGTGGCAACTCTACCTGCGTACTTGAACGCTTTAGAGGGCAAGGGTGTTCATATAGTAACTGTTAATGACTACT TGGCAAAAAGAGACGCTGAGTGGATGGGACCTATTTACAATTTCTTGGGACTTTCTGTTGGTGTGATAGTTCATGGACTG ACACATGAAGAGAGGAAAAAAGCGTACAACTGTGATATCACCTATGGTACAAACAATGAGTTTGGGTTTGATTACTTGCG AGACAACATGGCAATTTACAAAGAAGAGCTTGTGCAAAGAGAGCTAAACTATGCAATAATCGACGAGGTTGACTCAATCT TGATTGATGAGGCAAGAACGCCTCTTATCATCTCAGGTCCTGCTGAGAAATCAACAGACCTTTACAAAAGAGCAGACAAT TTTGTAAGAAGACTAAAACCTCTTTATTATAACAGTGATGATGACAAACAAATGCCTGATACAACCGGCTATGACTATAT AGTAAACGAGAAAAGACACACAGTTTCGCTCACAGAAGAGGGTATAAAAAAAGCTGAGAAATATTTTGGTGTTACAAACT TAGCTGACCCGGAAAATGCAACCCTTCACCATCACATTATCCAGGCACTAAAGGCTCACGGGCTTATGAAAAGAGACAGG GACTATGTTGTAAAAGATGGGCAGGTAATAATTGTTGATGAGTTTACTGGAAGACTTATGTATGGTCGAAGGTTTTCAGA AGGGCTTCACCAGGCCATTGAAGCAAAAGAAGGTGTGAGGATAGAAAGAGAAAGCAAAACTTTGGCAACAATAACTTTTC AGAACTATTTCAGGCTGTACAAAAAACTTGCTGGTATGACAGGTACTGCAAAAACTGAAGAGCAGGAGTTTAGAGAAATC TATAAGCTTGATGTCATAGAAATTCCTACACACAAACCAATGATACGAGTCGACCATCCAGACAAGGTTTACAAGACAGA AAAGGCAAAGTTTGAGGCAATTGTTCAGGAGATTGTTGAGACTCATAAAAAAGGTCAGCCTGTTTTGGTTGGTACTGTGT CAATTGAGAAGTCTGAGATGCTGAGCGAGATGCTCAAAAAACATGGTATAAAACATGAGGTTTTAAACGCAAAACACCAC GAAAAAGAGGCTATGATAATTGCAAAGGCTGGCCAAAAAGGTGCTGTGACAATTGCAACCAACATGGCAGGCCGTGGAAC AGACATTGTTTTAGGCGAGGGTGTTGCTGAGCTTGGTGGCCTCAAAGTAATCGGTACAGAGAGGCATGAAAGCAGGCGAA TAGACAACCAGCTTCGTGGAAGAGCCGGCCGTCAGGGTGACCCCGGCGAGTCAAGATTTTATGTGTCGCTTGAGGATGAT CTAATGAGGCTTTTCGGGTCTGAGAGGATTAAAAACCTTGTTGAGTCGCTTGGCTTGCCTGATGACCAGCCGATTGAACA CAAGCTCTTGTCTGATGCCATTGAAAAGGCGCAAAAGAGGGTTGAAGCGCGAAACTTTGAGATACGAAAACATCTTTTGC AGTTTGACGATGTTTTGAACAAGCAAAGAGAGATAATATACTCACAAAGGCGCAAAGTTTTAGAAGGTGAGAACTTAAGA GACTCTATCTTGGGCATGATAGATGAGCTTGTGGACTACAAGATAAAAGTGTACACAGGCGAAAGTCCTCATCCTGAAGA CTGGGATATAAAAGGTCTTTTGCAGGATTTGAAGTTTATATTTTTAGAAGATGAGCTTTCTGAGCAGGATGCAAAAAATA TGACAAAACAGGAGCTAAAAGAAAAGCTCATCTCAATTGCAAAAGAAAAATATGAGAAGAAAGAACAAGAAGTTGGCGAG CTTATGCGCGAGCTTGAAAGGGTTGTGCTTTTGCGAGTTGTTGACATGCACTGGATGGAACACATAGATGCAGTAGAACA GCTGAGAGAAGGCATATCTCTTCGCGCAATCGGTCAAAAAGACCCAATAGTTGAGTTCAGGTTCGAAGCGTTTGAGATGT TTGATGAGATGGTAAAAAGAATCCAGGAGGACACAATAAAGATTATACTTCATGCAAATGTTGAAAATATGCCTCAAAGA GAAAGAGTTGTTAAAGAGATGTATGAAAATGCACCATCAGACACACCTGTGAGAAAACCTGTTGTGAAAACACAGAAGGT TGGAAGAAACGATCCATGTCCTTGCGGGAGCGGCAAAAAATACAAAAAGTGTTGCGGAGCAGTTTGA Protein sequence : MLKIIEKLIGSYSEREIKKILPIVDKIESLASEYERLTDAELRQKTDIFKQRLKNGETLDDILPEAFAAVREAAWRTLKM RHFRVQLIGGIVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLAKRDAEWMGPIYNFLGLSVGVIVHGL THEERKKAYNCDITYGTNNEFGFDYLRDNMAIYKEELVQRELNYAIIDEVDSILIDEARTPLIISGPAEKSTDLYKRADN FVRRLKPLYYNSDDDKQMPDTTGYDYIVNEKRHTVSLTEEGIKKAEKYFGVTNLADPENATLHHHIIQALKAHGLMKRDR DYVVKDGQVIIVDEFTGRLMYGRRFSEGLHQAIEAKEGVRIERESKTLATITFQNYFRLYKKLAGMTGTAKTEEQEFREI YKLDVIEIPTHKPMIRVDHPDKVYKTEKAKFEAIVQEIVETHKKGQPVLVGTVSIEKSEMLSEMLKKHGIKHEVLNAKHH EKEAMIIAKAGQKGAVTIATNMAGRGTDIVLGEGVAELGGLKVIGTERHESRRIDNQLRGRAGRQGDPGESRFYVSLEDD LMRLFGSERIKNLVESLGLPDDQPIEHKLLSDAIEKAQKRVEARNFEIRKHLLQFDDVLNKQREIIYSQRRKVLEGENLR DSILGMIDELVDYKIKVYTGESPHPEDWDIKGLLQDLKFIFLEDELSEQDAKNMTKQELKEKLISIAKEKYEKKEQEVGE LMRELERVVLLRVVDMHWMEHIDAVEQLREGISLRAIGQKDPIVEFRFEAFEMFDEMVKRIQEDTIKIILHANVENMPQR ERVVKEMYENAPSDTPVRKPVVKTQKVGRNDPCPCGSGKKYKKCCGAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 8e-126 | 43 |
