Gene Information

Name : Calhy_0586 (Calhy_0586)
Accession : YP_003991696.1
Strain : Caldicellulosiruptor hydrothermalis 108
Genome accession: NC_014652
Putative virulence/resistance : Virulence
Product : atpase, flii/yscn family
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 639459 - 640754 bp
Length : 1296 bp
Strand : +
Note : TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: ate:Athe_2170 ATPase, FliI/YscN family; SMART: AAA ATPase

DNA sequence :
ATGATTGAAAAATTAAAATCAAAGATTGAAAATGCAAACTTTTACCAATTCACCGGGTTTGTTAACCAGGTGATAGGCCT
TACAATAGAATCACAGGGTCCGGCTGTTAGCATAGGCACGCTCTGCCGTATAAAAGCTGCAAAGACAGAGACTTTAGCAG
AGGTTGTGGGGTTTAAAGAGAACAAGGTACTTTTAATGCCGTACTCTGACCTTGTAGGTGTTTTTCCAGGCTGCAAAGTG
ATTGCACAGGACAGCATGTTTGAGGTGAAGGTGGGAAAAGAACTTTTGGGAAGAATCCTTGACGGTCTGGGTCAGCCAAT
TGACGGCAAAGGCGAGATAAAATCAAAGATAAAGTACCCTGTTGAAAACAGGGCGCCAAACCCGCTTGAAAGACCCAGGA
TAGACACCATAATGCCCCTTGGAATAAAGGCTATAGATGCTCTTTTGACCATTGGCAAGGGACAGAGAGTTGGCATATTT
GCAGGAAGCGGTGTTGGCAAAAGTACCCTTCTTGGCATGATTGCCCGAAATGCAAAGGCGGATGTCAATGTTCTTGCTTT
GATTGGTGAAAGAGGAAGAGAGCTCAAAGAGTTTCTGGAAAAGGATTTGAAGGAAGAAGGGCTTAAAAGGTCTGTTGTGG
TAGTTGCAACCTCTGATGAGTCGGCGCTGAAAAGAGTAAAGGCAGCATATGTTGCGATGGCAATTGCAGAGTATTTTCGC
GACCAGGGGCTTGATGTTCTTTTCTTAATGGACTCACTTACAAGGTTTGCGATGGCTCAAAGGGAGATAGGTCTTGCGGT
TGGTGAGCCGCCGGTATCAAGAGGATATACACCATCTGTGTTTTCTGTAATGCCAAAGCTTTTGGAGAGAGCTGGAAAAA
ATAAGAGAGGGTCTATCACGGCACTTTTCACTGTGCTTGTTGACGGTGACGATTTTAACGAGCCTATTACTGATACCGCA
CGGGGTATTTTGGACGGTCACATTGTCCTGTCAAGGGCGATAGCCAATAAAAACCACTATCCGGCAATTGATGTGCTTGC
AAGCATTAGCAGGGTGATGAACGATATTGTTGAGCCTTCTCACAGGGAGCTTGCGAACGAGACAAAACGAGTTTTAGCTG
TGTACAGGGAAACAGAGGATTTGATAAACATTGGTGCGTATACAAAAGGGTCGAACCCGGAGATTGATAGAGCGATTGAA
CTTGTGCCACGGATAAACCAGTTTTTAAGGCAGGAGGTTGACGAGAGGTTCGACTTTGAAGAGGAGATTGAGATGCTAAA
GGCTATAATCTCATAA

Protein sequence :
MIEKLKSKIENANFYQFTGFVNQVIGLTIESQGPAVSIGTLCRIKAAKTETLAEVVGFKENKVLLMPYSDLVGVFPGCKV
IAQDSMFEVKVGKELLGRILDGLGQPIDGKGEIKSKIKYPVENRAPNPLERPRIDTIMPLGIKAIDALLTIGKGQRVGIF
AGSGVGKSTLLGMIARNAKADVNVLALIGERGRELKEFLEKDLKEEGLKRSVVVVATSDESALKRVKAAYVAMAIAEYFR
DQGLDVLFLMDSLTRFAMAQREIGLAVGEPPVSRGYTPSVFSVMPKLLERAGKNKRGSITALFTVLVDGDDFNEPITDTA
RGILDGHIVLSRAIANKNHYPAIDVLASISRVMNDIVEPSHRELANETKRVLAVYRETEDLINIGAYTKGSNPEIDRAIE
LVPRINQFLRQEVDERFDFEEEIEMLKAIIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 4e-97 53
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-97 53
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 4e-97 53
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-96 52
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-96 52
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-97 52
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 7e-97 52
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 7e-97 52
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-94 51
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-94 51
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-86 51
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-86 51
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 9e-86 51
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 8e-86 49
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-84 49
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-84 49
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-85 49
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-85 49
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-84 49
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-83 48
escN AAC31513.1 L0034 Virulence LEE Protein 1e-83 48
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-83 48
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-83 48
escN YP_003236088.1 translocator EscN Virulence LEE Protein 2e-83 48
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 8e-84 48
escN AAK26715.1 EscN Virulence LEE Protein 1e-83 48
escN YP_003223475.1 translocator EscN Virulence LEE Protein 4e-84 48
escN AAL57542.1 EscN Virulence LEE Protein 1e-83 48
escN AAC38383.1 EscN Virulence LEE Protein 1e-83 48
escN CAC81862.1 EscN protein Virulence LEE II Protein 4e-84 48
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-84 48
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 6e-77 48
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-69 46
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 3e-70 46
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 6e-71 45
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 5e-71 45
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 3e-68 45
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 5e-71 45
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-71 45
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-71 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 6e-78 45
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-65 44
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-65 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Calhy_0586 YP_003991696.1 atpase, flii/yscn family VFG0192 Protein 1e-102 53
Calhy_0586 YP_003991696.1 atpase, flii/yscn family VFG0048 Protein 1e-96 53
Calhy_0586 YP_003991696.1 atpase, flii/yscn family VFG2144 Protein 6e-99 53
Calhy_0586 YP_003991696.1 atpase, flii/yscn family VFG0390 Protein 1e-96 52
Calhy_0586 YP_003991696.1 atpase, flii/yscn family VFG0515 Protein 4e-86 49
Calhy_0586 YP_003991696.1 atpase, flii/yscn family VFG1254 Protein 3e-88 49
Calhy_0586 YP_003991696.1 atpase, flii/yscn family VFG2499 Protein 5e-87 49
Calhy_0586 YP_003991696.1 atpase, flii/yscn family VFG0812 Protein 8e-84 48
Calhy_0586 YP_003991696.1 atpase, flii/yscn family VFG0730 Protein 6e-84 48
Calhy_0586 YP_003991696.1 atpase, flii/yscn family VFG2331 Protein 2e-82 46
Calhy_0586 YP_003991696.1 atpase, flii/yscn family VFG1008 Protein 2e-69 42
Calhy_0586 YP_003991696.1 atpase, flii/yscn family VFG2459 Protein 2e-68 41