Gene Information

Name : Calhy_0578 (Calhy_0578)
Accession : YP_003991688.1
Strain : Caldicellulosiruptor hydrothermalis 108
Genome accession: NC_014652
Putative virulence/resistance : Unknown
Product : heat shock protein hslvu, atpase subunit hslu
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1220
EC number : -
Position : 632397 - 633794 bp
Length : 1398 bp
Strand : +
Note : TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: ate:Athe_2178 heat shock protein HslVU, ATPase subunit HslU; SMART: AAA ATPase

DNA sequence :
ATGATGGAATTAACTCCTCAGGAGATTGTAAGAGAGCTTGACAAGTATATAGTTGGACAGGAAAGGGCAAAAAAGTGTGT
TGCCATTGCCCTCCGAAATAGGTACAGGCGCGCAAAACTCCCAAAGGAGCTTCAGGATGAGATAACGCCAAAGAACATCT
TGATGGTGGGACCAACAGGTGTTGGTAAGACAGAGATTGCAAGAAGACTTGCAAAACTTGTGAATGCTCCGTTTGTAAAA
GTTGAAGCAACAAAGTTTACTGAGGTTGGATATGTTGGAAGAGATGTAGATTCAATGGTTCGAGACCTTGTTGAAAATGC
AATATCGCTTGTGAAAAGCGAGTACATGGAAAGAATGAAAGAAAGAGCAAAAGCTCTTGTTGAGGACAGAATTTTGGAGA
TATTAATTCCTGAACCTCAGTCAAGAAAAGCAGGGTTTAAAAATCCGTTTGAAGCACTTTTTGGTGCCACCTCACAAGAG
ATGGAGCAGAGTTATCAGACAACAGATGACTATATCAGAACGCAAAGAGAGATTTTGCGCGAAAAACTTCGCTCTGGAGA
GCTTGAGGACAAGGTGATTGAGGTTGAGGTTGAAGATACTGTAAAGCCTCCATTTGAAATGATTATGGGCACAATTTCTG
ACGAGATGGGGATTTCTTTCCAGGACGTTTTTGGGTCACTATTTCCAAAGAAGAAGAAAAAGAAAAAGATGACAATAAGA
GAAGCGCGTGAGGTTTTAGAGCAGGAGGAATACAACAAGCTCATTGACATGGATGAGGTTATAAAAGAAGCAATTCAGAG
AGCTGAACAACATGGAATCATCTTTATTGATGAGATAGACAAGATTGCAGGAAAAGGTTCAAGTGTTGGGCCTGATGTTT
CAAGAGAAGGTGTGCAAAGAGACATTCTTCCCATTGTTGAGGGAAGCACTGTTATGACAAAATACGGTCCTGTAAAGACA
GACCACATTCTGTTTATTGCAGCTGGAGCTTTTCATGTTGCAAAGGTTTCTGACCTGATACCAGAACTTCAGGGAAGGTT
CCCAGTTGTTGTTGAGCTCAATCCTTTGACAGAAGAGGATTTCAAAAAGATACTCACGCAACCCAAAAATGCAATTATAA
AGCAGTATATTGAGCTTATGAAAACAGAAGGTGTCAATATTACCTTTACAGATGATGCAATAGAGGCAATTGCAAAGGTT
GCTGTGAAGATAAATGAGCAGAGCGAGAATATCGGTGCGCGAAGACTTCACACTGTTGTTGAAAAGATAATGGAAGACAT
TTCGTTTGAATATGCAAATGTTGAAAAACCAGTAGACCTTGTGATTGACAAGGATTATGTATATTCAAAGGTTTCGGATA
TTATAAAGGACAAAGATTTGAGCAGGTTCATAATATAA

Protein sequence :
MMELTPQEIVRELDKYIVGQERAKKCVAIALRNRYRRAKLPKELQDEITPKNILMVGPTGVGKTEIARRLAKLVNAPFVK
VEATKFTEVGYVGRDVDSMVRDLVENAISLVKSEYMERMKERAKALVEDRILEILIPEPQSRKAGFKNPFEALFGATSQE
MEQSYQTTDDYIRTQREILREKLRSGELEDKVIEVEVEDTVKPPFEMIMGTISDEMGISFQDVFGSLFPKKKKKKKMTIR
EAREVLEQEEYNKLIDMDEVIKEAIQRAEQHGIIFIDEIDKIAGKGSSVGPDVSREGVQRDILPIVEGSTVMTKYGPVKT
DHILFIAAGAFHVAKVSDLIPELQGRFPVVVELNPLTEEDFKKILTQPKNAIIKQYIELMKTEGVNITFTDDAIEAIAKV
AVKINEQSENIGARRLHTVVEKIMEDISFEYANVEKPVDLVIDKDYVYSKVSDIIKDKDLSRFII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 2e-93 50