Gene Information

Name : Calhy_0540 (Calhy_0540)
Accession : YP_003991650.1
Strain : Caldicellulosiruptor hydrothermalis 108
Genome accession: NC_014652
Putative virulence/resistance : Unknown
Product : class ii aldolase/adducin family protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : -
Position : 593514 - 594158 bp
Length : 645 bp
Strand : +
Note : PFAM: class II aldolase/adducin family protein; KEGG: csc:Csac_0723 L-ribulose-5-phosphate 4-epimerase

DNA sequence :
ATGCTTGAGAGTTTGAAAGAGCTTGTTTGTAAATACAATCTTTATCTTCCAAAATTTGGTCTTGTCACATGGACATCTGG
TAACGTCTCAGCACGCGACCCTGAGACAAACCTTGTTGTTATAAAGCCATCGGGTGTTATGTATGATGATTTGACACCTG
ACAAGATGGTTGTTGTTGATATGGATGGAAATATAGTTGAAGGAAATTTAAAACCTTCAACAGACACACTTACACATCTT
TATGTATACAAGCACATGCCACACATAAATGCTGTTGTCCATACTCATTCAAACTATGCAACAGCGTTTGCAGCCTTGGG
CCAGCCAATAAAAGTGTATTTGACAGCAATTGCCGATGAGTTTGGCTGTGAGATTCCATGCGGACCGTATGCTCAGATTG
GTGGTGAGGACATAGGCAAGGTGATAGTTGAGTATATAGGTTCAAGCCCGGCAATTCTTCTTCAGAACCATGGAGTTTTT
ACGATAGGCAAGACAGTTGATGAGGCAGTAAAAGCTGCTGTTATGGTAGAAGATGTAGCAAAAACAGTATTTATTGCAAA
GATGATGGGCGAGCCTATCGAGATTCCACCTGAAGAGGTAAAAAGAGCTCATGAGAGGTACATGACAAAATATGGGCAAA
AATAA

Protein sequence :
MLESLKELVCKYNLYLPKFGLVTWTSGNVSARDPETNLVVIKPSGVMYDDLTPDKMVVVDMDGNIVEGNLKPSTDTLTHL
YVYKHMPHINAVVHTHSNYATAFAALGQPIKVYLTAIADEFGCEIPCGPYAQIGGEDIGKVIVEYIGSSPAILLQNHGVF
TIGKTVDEAVKAAVMVEDVAKTVFIAKMMGEPIEIPPEEVKRAHERYMTKYGQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 2e-25 45