Name : Calhy_2461 (Calhy_2461) Accession : YP_003993527.1 Strain : Caldicellulosiruptor hydrothermalis 108 Genome accession: NC_014652 Putative virulence/resistance : Unknown Product : alpha amylase catalytic subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 2579513 - 2581186 bp Length : 1674 bp Strand : + Note : KEGG: ate:Athe_0165 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain DNA sequence : ATGGACTTGCACAAAAAGTGGTGGAAGGAAGCTGTTGTATATCAAATCTACCCAAGAAGCTTTTATGACTCAAACGGTGA TGGAATTGGAGATTTGTCAGGAATAATAGAAAAACTTGATTATCTTCAAGAGCTTGGAGTAGACGTCATTTGGCTAAATC CCATCTACAAATCTCCAAACGCAGACAATGGTTATGACATCAGCGATTACTATGACATCATGGATGAGTTTGGTACAATG GAAGATTTTGATAGGCTCTTGAATGAAGCCCACAAAAGAGGAATTAAAATTGTAATGGACCTTGTAGTGAACCACACATC TGATGAACACAAATGGTTTCAAGAGTCCAGAAAATCAAAAGACAGTCCTTACAGAGATTTTTATTTCTGGCGGCCTGGCA AAAATGGAGGGCCTCCTAATAACTGGACATCCTTTTTCAGCGGCCCTGCTTGGGAATACGATGAGCTGACAGGAGAATAT TATCTTCACCTTTTTGCTGTAAAGCAGCCAGACCTCAATTGGGACAATCCAAAAGTCAGACAAGAAATTTACAAAATGAT GAAGTGGTGGCTTGACAAAGGCATAGATGGGTTTAGAATGGATGTAATAAACCTCATTTCAAAAGTTGAAGGACTGCCAG ATGACCCAGATGAAAATCAAGGAGGTTTGATTGGTTTTAAATACTATGCCAACGGTCCAAGGGTGCATGAATATCTTCAG GAAATGAACAGAGAAGTGCTTTCTAAATACGACATCATGACAGTGGGAGAGACTCCATTTGTAACTCCTGAGATTGCAAA GCTGTATGTAGAGTATGACAGAAACGAACTGAACATGGTTTTCCATTTTGAGCACATGGATATGGACTGTAGCGGCAGCA AGTGGAATATAAAACCCTGGAAACTGACTGATTTGAAAAAGATAATGTACAAGTGGTATTTGGCTTTAAAAGACAAGGGC TGGAATTCACTTTACCTTAACAACCATGACCAGCCAAGGATGGTCTCACGCTTTGGAAACGACAAAGAGTATAGGGTTGA GTCTGCAAAGCTTTTGGCAACCCTGCTTCACACATGGCAGGGAACTCCTTATATTTACCAGGGCGAAGAGATTGGTATGA CAAACTGCAAGTTTGAAAGTATTGATGAGTTCAGAGACATTGAAACACTCAACTGGTACAAAGAGATGAAAAAACTTGGA AAATCAGACGAAGAGCTTTTAGAAATTTTAAACAAAAGAAGCAGAGACCATGCACGAACACCAATGCAGTGGGATGATTC TGAAAACGCAGGATTTACAAAAGGCACCCCATGGATAAAGGTAAATCCAAATTATAAGGAAATAAATGTTAAAAAAGCTT TAGAAGATAAAAATTCGGTGTTTTACTACTATAAGAAATTGATTGAACTTAGAAAAAAACATCCTGTCATTGTATATGGT GATGTACAAATGCTTTATGAGGACGATGAAAAGATCTTTGCATATACAAGAAACTATGAAGATGAAAGGCTTCTTGTTGT CATGAACTTTTCTGAAGCAGAAAGTGAGTTTTTAGCACCAAAAGAAATATTCACTCAAAAACCTGAACTTTTGATAAGTA ACTATGAAGTAGATGATAACATTCAAGAAAAAATTGTTTTAAAACCATATGAAGCAAGGGTATATAAAATATAA Protein sequence : MDLHKKWWKEAVVYQIYPRSFYDSNGDGIGDLSGIIEKLDYLQELGVDVIWLNPIYKSPNADNGYDISDYYDIMDEFGTM EDFDRLLNEAHKRGIKIVMDLVVNHTSDEHKWFQESRKSKDSPYRDFYFWRPGKNGGPPNNWTSFFSGPAWEYDELTGEY YLHLFAVKQPDLNWDNPKVRQEIYKMMKWWLDKGIDGFRMDVINLISKVEGLPDDPDENQGGLIGFKYYANGPRVHEYLQ EMNREVLSKYDIMTVGETPFVTPEIAKLYVEYDRNELNMVFHFEHMDMDCSGSKWNIKPWKLTDLKKIMYKWYLALKDKG WNSLYLNNHDQPRMVSRFGNDKEYRVESAKLLATLLHTWQGTPYIYQGEEIGMTNCKFESIDEFRDIETLNWYKEMKKLG KSDEELLEILNKRSRDHARTPMQWDDSENAGFTKGTPWIKVNPNYKEINVKKALEDKNSVFYYYKKLIELRKKHPVIVYG DVQMLYEDDEKIFAYTRNYEDERLLVVMNFSEAESEFLAPKEIFTQKPELLISNYEVDDNIQEKIVLKPYEARVYKI |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-148 | 58 |