Gene Information

Name : Calhy_2275 (Calhy_2275)
Accession : YP_003993348.1
Strain : Caldicellulosiruptor hydrothermalis 108
Genome accession: NC_014652
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein thic
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 2361702 - 2362967 bp
Length : 1266 bp
Strand : -
Note : KEGG: csc:Csac_0255 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGAAAACCCAGATGACATATGCAAAAGAAGGAATATTTACACGCGAGATGGAACTTGCAATCCAAAATGAAGAGATAGA
TAAAGAAGAATTCTTGCAAAAGGTTGCAGAGGGCAAGATTGTCATACCTGCAAACAGAAACAGAAAAAGAGACAAATACT
TTCCAATTGGAGATGGAACATATGTAAAAATCAATGTAAATATTGGCGTGTCTGAAGCATGTCCGAATTTTGATATAGAG
GTTCAAAAGCTTGAACTTGCTAAAAAATTTAATGTTGAATCTGTGATGGATTTGTCAAGCGGGCTTGATGCTTCAAACTT
CAGAAGATACATTCTTCAAAACTATGACTTTATAGTAGGAACAGTTCCAGTTTACCAGGTTGCTTCAAGGCATGACGACA
TTACAAAGGTTGACAGCAAAGAGTTTATAGAAGAGATTGAAAGACAGGCAGAAGAAGGAGTTGACTTTTTCACAATACAT
GCAGGAATTACAAGAAGGACTTTGGAGAGGTTTGAAAAAAATGAGCGTCTGCTCAAGATTGTCTCAAGAGGCGGAGCACT
TCTTTATAAATGGATGATGGCAAACGGAAAAGAGAATCCTTTGTATGAGCATTTTGATGAGATTTTGAAGATATGCAAAA
AACATGATGTTACAATCAGCCTTGGCGATAGCCTAAGACCAGGTGCGGTGGCTGATGCAACAGACGCGCTGCAGATAGAA
GAGCTTATAAACCTTGGCGAGCTTACAAAAATGGCTTGGAAAGAGGATGTTCAGGTGATAATAGAAGGGCCAGGGCACAT
GAGAGCAAATGAGATTGCAGCAAACATGGTAATTCAAAAAAGGCTTTGCCACGGCGCACCGTTTTATGTTTTAGGACCTC
TTACAACAGACATTGCAGCTGGGTACGACCATATATCAGGTGCGATGGGGGCACTCATTGCAGCTTTAAATGGAGCAGAT
TTTCTGTGCTATGTTACACCTGCTGAACATTTGAGACTTCCATCTTTAGATGATGTCAAAGAAGGGATTGTTGCGTTCAA
AATTGCAGCGCACAGTGCAAATATAGCAAAAGGTTTTAAAAAGCCACTTGAAAAGGATATTGAGATGTCAGTAGCAAGAA
GAGACCTTGATTGGGAAAAGATGATAAGCCTTTCGGTTGACCCTGAGAAGGCAAGAGAATACAGAAGTAGTTTCTCTTCT
GATACATGTTCAATGTGTGGAAGACTGTGTGCTGTGAAAAATTCAAGAGATGAAGCTATTTTGTAA

Protein sequence :
MKTQMTYAKEGIFTREMELAIQNEEIDKEEFLQKVAEGKIVIPANRNRKRDKYFPIGDGTYVKINVNIGVSEACPNFDIE
VQKLELAKKFNVESVMDLSSGLDASNFRRYILQNYDFIVGTVPVYQVASRHDDITKVDSKEFIEEIERQAEEGVDFFTIH
AGITRRTLERFEKNERLLKIVSRGGALLYKWMMANGKENPLYEHFDEILKICKKHDVTISLGDSLRPGAVADATDALQIE
ELINLGELTKMAWKEDVQVIIEGPGHMRANEIAANMVIQKRLCHGAPFYVLGPLTTDIAAGYDHISGAMGALIAALNGAD
FLCYVTPAEHLRLPSLDDVKEGIVAFKIAAHSANIAKGFKKPLEKDIEMSVARRDLDWEKMISLSVDPEKAREYRSSFSS
DTCSMCGRLCAVKNSRDEAIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 1e-71 44
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 1e-71 44