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Name : Calhy_1996 (Calhy_1996) Accession : YP_003993075.1 Strain : Caldicellulosiruptor hydrothermalis 108 Genome accession: NC_014652 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 2043790 - 2045283 bp Length : 1494 bp Strand : - Note : KEGG: ate:Athe_0659 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type DNA sequence : GTGGGGATGCAGGATTTTGAGTTTACACAGGAAGAGCTAAACGAACAGATACAGAACAGGATAAAAAAACTAAAAGAACT TCAGCAGAATAAATACAATCCATATGAAAAGGTAAAGTACGACCCGACACATTATTCCGCTGATATTAAAGAAAACTTTG AAGTATTTGAAGGTAAGTTTGTCTGTGTTGCAGGAAGAATGCTTTCAAAAAGAGGTCATGGCAAGGCTTCATTTGTCGAT ATTTTGGACACAAAAGGAAAAATCCAGATTTATATAAAGATTGATGAGGTTGGAGAAGAAAAGTACGAGGAGTTCAAAGA GTATTATGATATTGGAGATATAATAGGTGTAAAAGGTGAGGTTTTCAAGACTCACAAGGGCGAAATTTCGGTAAAGGCGA AAGAGATTGAGATGCTCACCAAGTGTTTGCGACCACTTCCTGAAAAGTGGCATGGGCTCAGAGATATTGATACAAGGTAT AGAAAAAGGTATCTTGATCTAATTGTAAATCCACAAGTTCGAGATACTTTTATCAAAAGAAGTTTAATAATCCGTTCAAT CCGCAAATTTTTAGATGACAGGGGATTTTTGGAGGTAGAAACTCCTGTTTTGAGCCCTGTTGCAGGTGGTGCTGCTGCAA GACCTTTTATTACTCATCACAATGCTTTGGACATTGACCTGTATTTGAGAATTGCAACAGAGCTTCACTTAAAAAGACTT ATAGTTGGTGGGTTTGATAAGGTATACGAGCTTGGTCGTGTGTTTAGAAATGAAGGTATTTCAATAAAACACAACCCTGA ATTTACAACCATTGAGATTTACCAAGCATATGCCGACTACAAGGATATGATGAACCTTACAGAAGAGCTCATCACAACAG TTGCAAAAGAGGTTTTGGGCACATTAAAAATAACATATCAAGGGCAGGAGATTGACCTGACACCGCCATGGCAAAGACTT ACCATGGTTGAAGCAATCAAAAAGTATGTTGGTGTTGACTTTGAAAATGTGAATTCTATAGATGAAGCAAGAAAAATTGC AAAAGATCTTGGGATTGAGGTTGAGGAAAACTGGCAGGTAGGTCATATTATAAATGAGATATTTGAAAAGAAAGTAGAAG ATTTTCTTGTTCAGCCAACATTTATAATGGACTATCCGGTTGAGGTTTCTCCGCTTGCAAAAAGAAAGAAAGACAATCCA CAGTTTACAGAGAGGTTTGAGCTTTTCATCACTTGCAGGGAATTAGCCAACGCATTTTCAGAGCTCAACGACCCGTTTGA CCAGAAAGAGAGATTTTTAGAGCAGCTTAAAGAAAGGCAAAGAGGTAACCAAGAAGCCCACATGATGGATGAGGACTTTA TAGAAGCGCTTGAGTACGGCATGCCACCGACAGGTGGGCTTGGAATAGGAATTGACAGGCTGGTTATGCTTCTGACAGAT TCATATTCAATCAGAGATGTGTTACTTTTCCCAACAATGCGACCGAAGGATTAG Protein sequence : MGMQDFEFTQEELNEQIQNRIKKLKELQQNKYNPYEKVKYDPTHYSADIKENFEVFEGKFVCVAGRMLSKRGHGKASFVD ILDTKGKIQIYIKIDEVGEEKYEEFKEYYDIGDIIGVKGEVFKTHKGEISVKAKEIEMLTKCLRPLPEKWHGLRDIDTRY RKRYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETPVLSPVAGGAAARPFITHHNALDIDLYLRIATELHLKRL IVGGFDKVYELGRVFRNEGISIKHNPEFTTIEIYQAYADYKDMMNLTEELITTVAKEVLGTLKITYQGQEIDLTPPWQRL TMVEAIKKYVGVDFENVNSIDEARKIAKDLGIEVEENWQVGHIINEIFEKKVEDFLVQPTFIMDYPVEVSPLAKRKKDNP QFTERFELFITCRELANAFSELNDPFDQKERFLEQLKERQRGNQEAHMMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTD SYSIRDVLLFPTMRPKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-109 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Calhy_1996 | YP_003993075.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-109 | 54 |
