Gene Information

Name : Calhy_1578 (Calhy_1578)
Accession : YP_003992663.1
Strain : Caldicellulosiruptor hydrothermalis 108
Genome accession: NC_014652
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1606348 - 1607094 bp
Length : 747 bp
Strand : -
Note : KEGG: ate:Athe_1156 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGGAACTATTAAAAGATAAAGTGGCGCTCATCACAGGCGCATCACGTGGAATTGGAAGAGCAATTGCTTTAAAGTTTGC
TCAAAACGGAGCAAATGTAATTATTAACTATTCGTCAAGTCAGTCCCAAGCAGAAAATTTGAAAGAAGAGATAGAGAAAA
TAGGAACAAAAACGATGATAATAAAATGTGATGTTTCAAGTGCAGATGAGGTAAATCAGATGTTCTCACAAGTGGAAAAG
GAGTTTGGAAGGCTTGATATACTTGTTAACAATGCCGGAATTACAAAAGATGGACTAATTCTTAGAATGAATGAGGAAGA
CTTTGATAAGGTTATTGCAATAAATTTAAAAGGAGCGTTTTTGTGCGCAAGAGCAGCTGCCAGAATGATGGTAAAACAAC
GGTTTGGCAACATAATTAATATATCCTCTGTTGTAGGAATTGCGGGCAATGTTGGACAGGCAAATTATGCAGCGTCCAAA
GCAGGAATAATAGGTCTTACAAAGTCTCTTGCAAAAGAACTTGCGTCCCGAAATATCAGGGTAAATGCAATAGCACCGGG
CTTTATTAAAACTGACATGACAGAGGTTTTAAGTGACAAGGTAAAAGAGGCCATGCTTTCTTCCATCCCACTTGGTCGGT
TTGGCGAGGCTGATGAGGTCGCAAACGTGGCACTTTTTCTTGCCTCAAGCCTTTCATCCTATATTACTGGGCAAGTTATT
GTTGTTGACGGTGGGATGATTATGTAA

Protein sequence :
MELLKDKVALITGASRGIGRAIALKFAQNGANVIINYSSSQSQAENLKEEIEKIGTKTMIIKCDVSSADEVNQMFSQVEK
EFGRLDILVNNAGITKDGLILRMNEEDFDKVIAINLKGAFLCARAAARMMVKQRFGNIINISSVVGIAGNVGQANYAASK
AGIIGLTKSLAKELASRNIRVNAIAPGFIKTDMTEVLSDKVKEAMLSSIPLGRFGEADEVANVALFLASSLSSYITGQVI
VVDGGMIM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 5e-40 43
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 4e-40 43
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 1e-39 43
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 9e-40 43
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 1e-32 42
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 4e-41 42