Gene Information

Name : Calhy_1566 (Calhy_1566)
Accession : YP_003992651.1
Strain : Caldicellulosiruptor hydrothermalis 108
Genome accession: NC_014652
Putative virulence/resistance : Unknown
Product : binding-protein-dependent transport systems inner membrane component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2011
EC number : -
Position : 1596637 - 1597290 bp
Length : 654 bp
Strand : -
Note : PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1617 binding-protein-dependent transport systems inner membrane component

DNA sequence : 
ATGTCTGAAACTTTGCAGCTGTTATTAGTTTCTACATGGCAAACTATATACATGGTGGTTATTTCAACACTTATAGCAAC
AGTGCTGGGAATACCACTTGGTGTGTTCCTTATGGTGACTGACAAGGGGCAAATACTTCAAAATGATATTTTAAATAAGA
TATTGAGTACCATTGTCAATATCTTTCGTTCAATACCATTTGTGATTCTTTTGATAGTACTTATGCCTTTTACCCGACTA
ATAGTTGGAACATCAATTGGAACTACTGCAGCAATTGTGCCTTTGTCAATTGCAGCTATTCCTTTTATGGGTAGAATTAC
AGAAACAGCTTTGAGAGAGGTAGACCATGGCGTTATAGAAGCGGCTCAGGCTATGGGAGCTTCACCCTTTCAAATTATAA
CTAAAGTACTGATTCCTGAGGCACTGCCATCAATTGTCTCAGGAATCACCATAACTGCCATAAATCTGGTTGGATATTCT
GCTATGGCAGGTGTTATAGGTGGAGGTGGATTAGGAGATTTGGCTGTCAGGTATGGGTATCAGCGGTTTATGATTGACAT
AATGCTTTGGACTGTAGCAATTTTGATTGCTATGGTGCAGTTGACGCAGCTTATAGGAGATTTTTTTGTTCGACGGCTAT
CAAAAAATAGGTAA

Protein sequence : 
MSETLQLLLVSTWQTIYMVVISTLIATVLGIPLGVFLMVTDKGQILQNDILNKILSTIVNIFRSIPFVILLIVLMPFTRL
IVGTSIGTTAAIVPLSIAAIPFMGRITETALREVDHGVIEAAQAMGASPFQIITKVLIPEALPSIVSGITITAINLVGYS
AMAGVIGGGGLGDLAVRYGYQRFMIDIMLWTVAILIAMVQLTQLIGDFFVRRLSKNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0462 YP_039911.1 transport system membrane protein Not tested vSa¥á Protein 6e-32 58
SAS0420 YP_042547.1 transport system membrane protein Not tested vSa¥á Protein 6e-32 58