|
Name : Calhy_1223 (Calhy_1223) Accession : YP_003992312.1 Strain : Caldicellulosiruptor hydrothermalis 108 Genome accession: NC_014652 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1131 EC number : - Position : 1252212 - 1252934 bp Length : 723 bp Strand : + Note : KEGG: csc:Csac_2189 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase DNA sequence : TTGGACAAAGCTATAAAAATTGAAAGACTTACAAAGAAATTCGGTAGCTTTGTTGCGGTGAATAATATTTCATTTGAGGT TCCAAAGGGTTGTATTTTTGGACTGCTCGGACCTAATGGCTCTGGGAAAACCACAACTATAAAAATAATCTGCGGAGTAT TAAGAGCTACAGAGGGTTATGTTGAAGTTCTTGGGAAGGATGCTTCAAAATACCCTGAAGAGGTAAGACAAAATATTGGG TATGTTTCTCAAAAATTTAGTTTGTATGAGGATTTGACGATTGAAGAGAACATCAATTTTTATGGAGCTGTGTATGGTCT TTCAAAAAACGAAATTGAGACAAAAAAGAAACAACTTGTAAAGCTTTTCAAATTTGAAGGTAGAGAAAAGTCTCAAGTCA GTACCTTATCCGGCGGAATGAAACAAAAACTTGCTTTTGCATGTGCCACACTGCACAATCCGCAAATCCTAATTTTGGAT GAGCCCACAGCAGGAGTTGACCCCATTTCAAGAAAGGAATATTGGGAAATGATAAAATTTTTTTCAAACAGCGGTGTGAC AGTGCTTGTAACAACCCATTATATGGACGAGGCAGAAAGATGTGATGTTGTTGCATTTATGTTCAATGGAATTTTAAAAG AGATTGACACACCTTATAATGTAAAGAAAAAGTATATGTCTGACAGCATAGAGGATGTCTTTGTGAAGGTATTTTCTGAG TAA Protein sequence : MDKAIKIERLTKKFGSFVAVNNISFEVPKGCIFGLLGPNGSGKTTTIKIICGVLRATEGYVEVLGKDASKYPEEVRQNIG YVSQKFSLYEDLTIEENINFYGAVYGLSKNEIETKKKQLVKLFKFEGREKSQVSTLSGGMKQKLAFACATLHNPQILILD EPTAGVDPISRKEYWEMIKFFSNSGVTVLVTTHYMDEAERCDVVAFMFNGILKEIDTPYNVKKKYMSDSIEDVFVKVFSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0094 | NP_763649.1 | ABC transporter ecsA-like protein | Not tested | SCCpbp4 | Protein | 2e-38 | 43 |
| SH0081 | YP_251996.1 | hypothetical protein | Not tested | SCCmec | Protein | 6e-31 | 42 |
