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Name : Calhy_1205 (Calhy_1205) Accession : YP_003992294.1 Strain : Caldicellulosiruptor hydrothermalis 108 Genome accession: NC_014652 Putative virulence/resistance : Unknown Product : nusg antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 1232281 - 1232805 bp Length : 525 bp Strand : + Note : TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: ate:Athe_1532 NusG antitermination factor; SMART: NGN domain protein; KOW domain protein DNA sequence : ATGAGTGATAAAAGAGCAAAATGGTATGTTGTTCATACCTATGCAGGCTATGAAAATAAGGTAAAAGCCAATTTAGAAAA GATAATTGAAAATAGAAATTTGGCTGATAGGATTTTAGATATCAGGATTCCCACAGAACTTGTTACTGAAATTAAGGATG GAAAGAAAATAGTGAAAGAAAAAAAGAAATTTCCTTCGTATGTGCTGATCAAAGCTGTTATGGACAATGAAATATGGTAC ACTATAAGAAACGTCAGAGGCGTAACTGGTTTTGTGGGTCCTGAATCAAAACCTACCCCCCTTACGGATGAAGAAATAGA AGCAATGGGTATAAAGGAAGAAGTTGTAGAGATATTTGATATTGAAGTTGGTGATAATGTTAAGGTTGTATCTGGTCCAT TTACTGATTTTTATGGGCCAGTTGTTGAGATAAACAAAGAACGAAGAAAAGTAAAAGTGATGCTAAACCTATTTGGGAGA GAAACTCCTGTGGAATTTGATTACCATCAGGTAGAGAGATTATAA Protein sequence : MSDKRAKWYVVHTYAGYENKVKANLEKIIENRNLADRILDIRIPTELVTEIKDGKKIVKEKKKFPSYVLIKAVMDNEIWY TIRNVRGVTGFVGPESKPTPLTDEEIEAMGIKEEVVEIFDIEVGDNVKVVSGPFTDFYGPVVEINKERRKVKVMLNLFGR ETPVEFDYHQVERL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 5e-27 | 45 |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 6e-28 | 43 |
