Gene Information

Name : GY4MC1_3438 (GY4MC1_3438)
Accession : YP_003990708.1
Strain : Geobacillus sp. Y4.1MC1
Genome accession: NC_014650
Putative virulence/resistance : Resistance
Product : spermidine/putrescine ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3842
EC number : -
Position : 3423286 - 3424359 bp
Length : 1074 bp
Strand : -
Note : TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; transport-associated OB domain-containing protein; KEGG: gwc:GWCH70_0323 spermidine/putrescine ABC transporter ATPase; SMART: ATPase AAA

DNA sequence :
ATGGAGAAAGAGGCAATCATCCGCTTTGAGCGGGTGACGAAGGAATACGATGGGTTAGTCGTGCTTGATGATGTCAGTTT
TGAGATTGAGCGCGGGAAGTTTTACACACTGCTTGGGCCATCGGGATGCGGAAAGACGACGATTCTTCGCTTAATTGCGG
GGTTTGCAGAGCCGACGAAAGGAACAATTTATTTTCACGGGAAGCCGGTGAATCACGTTCCCGCCAATAAGCGGCAAGTA
AATACGGTGTTTCAAGATTACGCCTTGTTTCCGCATTTGAACGTGTTTGAAAACGTGGCGTTTGGGCTGCGGATAAAAAA
GAAAAAGCGTTCGGAAATTGAGGAAAAAGTCCAACAGGCGCTCCGGTTTGTGAATTTGGAAGGGTATGAGAATCGCAGCA
TTCAAGAAATGTCCGGAGGCCAGCGGCAGCGGGTGGCGATTGCGCGCGCGATCGTCAACGAGCCAGAAGTGCTTTTGCTC
GATGAGCCGCTGTCGGCGCTTGATTTAAAGTTGCGTACCGAAATGCAATATGAGCTCCGTGAATTGCAGCGCCGGTTAGG
GATTACGTTTATTTTTGTCACCCATGACCAAGAAGAGGCGCTGGCGATGTCAGACCAAATTTTCGTGCTGAATAAAGGAA
AAATCCAGCAAAGCGGCACGCCAAAAGACATTTACGATGAGCCGGTTAATCGGTTTGTTGCTGATTTTATTGGTGAATCG
AACATCTTGCGGGGGACGATGATCGAAGATTACCTTGTCGAATTCGCAGGAAAGCGGTTTACGTGCGTGGACAAAGGCTT
TCGCCCGAACGAGCCGGTCGATGTTGTCATCCGCCCGGAAGATTTGGAAATTACGACAAAAGATCAAGGAAAACTCCAAG
TGCGCGTTGATTCGCAGCTGTTCCGCGGCGTACATTACGAGCTATGCTGCTATGACGAAGATGGAAATGAATGGCTCGTC
CATTCGACAAAAAAAGCGGAAGTAGGGGAAGAAATCGGGCTTTATTTTGACCCAGAGGATATTCATGTCATGCACATCAG
CGAAGATGATGGTGAGGGATCCGATGAAAAATAG

Protein sequence :
MEKEAIIRFERVTKEYDGLVVLDDVSFEIERGKFYTLLGPSGCGKTTILRLIAGFAEPTKGTIYFHGKPVNHVPANKRQV
NTVFQDYALFPHLNVFENVAFGLRIKKKKRSEIEEKVQQALRFVNLEGYENRSIQEMSGGQRQRVAIARAIVNEPEVLLL
DEPLSALDLKLRTEMQYELRELQRRLGITFIFVTHDQEEALAMSDQIFVLNKGKIQQSGTPKDIYDEPVNRFVADFIGES
NILRGTMIEDYLVEFAGKRFTCVDKGFRPNEPVDVVIRPEDLEITTKDQGKLQVRVDSQLFRGVHYELCCYDEDGNEWLV
HSTKKAEVGEEIGLYFDPEDIHVMHISEDDGEGSDEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-29 43
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GY4MC1_3438 YP_003990708.1 spermidine/putrescine ABC transporter ATPase BAC0604 Protein 2e-31 41