|
Name : GY4MC1_3196 (GY4MC1_3196) Accession : YP_003990484.1 Strain : Geobacillus sp. Y4.1MC1 Genome accession: NC_014650 Putative virulence/resistance : Unknown Product : alpha amylase catalytic subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 3183299 - 3184963 bp Length : 1665 bp Strand : - Note : KEGG: gwc:GWCH70_0601 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain DNA sequence : TTGAAGAAAGCTTGGTGGAAAGAGGGAGTCGCATATCAAATTTATCCGAGAAGCTTCATGGATTCCAATGGAGACGGAAT TGGCGATCTTCGCGGAATTATCGGGAAACTTGATTATTTAAAAGATCTTGGCATTGATATTATATGGATTTGCCCGGTTT ACAAGTCGCCGAATGCCGATAACGGATATGATATTAGCGACTATCACGCGATCATGGAAGAGTTTGGAACAATGGAAGAC TTTGATTTGCTGCTGGAAGAAGTTCATCGGCGCGGTATGAAATTGATTTTAGATTTAGTCATTAATCATACAAGTGATGA ACATCCATGGTTTATTGAATCGCGTTCATCGCGGGATAACCCGAAACGGGATTGGTACATTTGGCGCGATGGCAAAAACG GAAAAGAGCCGAACAATTGGGAAAGCATTTTTGGTGGATCGGCGTGGGAATATGATCCGAAAACAGACCAATACTACTTG CATATATTTGATGTGAAGCAGCCGGATTTAAATTGGGAAAACGAAGAAGTGCGCCGCGCATTGTATAAAATGATTAATTG GTGGCTGGATAAAGGGATTGACGGTTTCCGTGTCGATGCAATTTCTCATATCAAGAAAAAGCCGGGATTGCCGGATTTGC CGAATCCGAAAGGACTTGACTATGTTCCTTCGTTTGCCGGCCATATGAACCAAGAGGGAATTATGGACTATTTAAGAGAG CTTAAAATGCAAACGTTTGCACACTATGATATTATGACGGTTGGCGAAGCAAACGGTGTTACGATCGAAGACGCGGAAGC ATGGGTCGGCGAAGAAAACGGAATCTTCAATATGATTTTCCAGTTTGAACATTTAGGGCTTTGGCAAAAAGAAACAAACG GTGGGGTGGATGTGCGTCAATTAAAACGCACGTTGACAAAATGGCAAAAAGGCTTGGAAAACCGCGGCTGGAACGCGTTA TTTTTGGAAAATCACGATCAGCCCCGTTCTGTTTCAATATGGGGAAATGATAAGGAATACCTTACTGAAAGTGCCAAGGC GCTCGGCGTGATGTACTTTTTCATGCAAGGAACTCCTTTCATTTATCAAGGACAAGAAATCGGCATGACAAACGTCCGCT TTCCGGATATCGATGATTATAAAGATGTTGCGGTTAAAAAGATGTATCAGCTGGAGCGGGAAAAAGGGCGTTCGCATGAA GAAGTGATGGAAGTTATTTGGAAAACAGGACGCGACAATTCGCGAACCCCGATGCAATGGTCCGCCGCGCCAAACGCTGG ATTTACGACAGGAACGCCGTGGATAAAAGTGAATGAAAACTATAAGACCATTAACGTCGAGGCGCAATTGCGCGACCCGA ATTCCGTCCTTCAGTTTTACAAAAAAATGATTCGGCTTCGCAAAGAAAACGAAGTGTTCGTTTACGGAACGTATGATTTG CTTTTGGAAAAGCATCCGGCGATTTACGCATATACAAGAACGCTCGGAGACGAAAAAGCGGTGATTATTGTCAATTTAAG CGCCAAACCAGCTATGTACCGTTATGATGGCCTTCGTTTAAATTCAGATAACTTAGTGCTGCAAAACTATGATGTTAAAC CGCATAAAAACGCGACGCGCTTTAAGCTAAAACCTTATGAAGCGCGCGTATATTTATGGAATTAG Protein sequence : MKKAWWKEGVAYQIYPRSFMDSNGDGIGDLRGIIGKLDYLKDLGIDIIWICPVYKSPNADNGYDISDYHAIMEEFGTMED FDLLLEEVHRRGMKLILDLVINHTSDEHPWFIESRSSRDNPKRDWYIWRDGKNGKEPNNWESIFGGSAWEYDPKTDQYYL HIFDVKQPDLNWENEEVRRALYKMINWWLDKGIDGFRVDAISHIKKKPGLPDLPNPKGLDYVPSFAGHMNQEGIMDYLRE LKMQTFAHYDIMTVGEANGVTIEDAEAWVGEENGIFNMIFQFEHLGLWQKETNGGVDVRQLKRTLTKWQKGLENRGWNAL FLENHDQPRSVSIWGNDKEYLTESAKALGVMYFFMQGTPFIYQGQEIGMTNVRFPDIDDYKDVAVKKMYQLEREKGRSHE EVMEVIWKTGRDNSRTPMQWSAAPNAGFTTGTPWIKVNENYKTINVEAQLRDPNSVLQFYKKMIRLRKENEVFVYGTYDL LLEKHPAIYAYTRTLGDEKAVIIVNLSAKPAMYRYDGLRLNSDNLVLQNYDVKPHKNATRFKLKPYEARVYLWN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 6e-123 | 49 |
