Gene Information

Name : GY4MC1_2899 (GY4MC1_2899)
Accession : YP_003990201.1
Strain : Geobacillus sp. Y4.1MC1
Genome accession: NC_014650
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2882756 - 2884918 bp
Length : 2163 bp
Strand : +
Note : KEGG: gwc:GWCH70_0889 ATPase AAA; PFAM: ATPase AAA; ATPase AAA; UvrB/UvrC protein; Clp ATPase-like; SMART: ATPase AAA

DNA sequence :
ATGCTTTGCCAAGTATGCCAACAAAACGAAGCAACAGTATTTGTCAACTTGCAATTTAACCATGAGAAAAAACAAATGCA
TCTTTGCCATGAATGTTATGAAAAACAAAAACAAGAGCTTTCCATCCCAATGAACTTCGGGTTTGGAGGCTTTTCGTCAT
TCCCGTTTGATGATTTCTTTATGGATGGATTTTCGCCAATTTCGGAAATGGGAGCGCCACAGCCAAACACCGCACAGCCA
TCGCACCGCAACAGAAAAGGCGGCGGCTTCCTTGATCAATTTGGCCGCAACTTAACGCAACTGGCGAAAGCAGGTCTCAT
TGATCCAGTCATCGGCCGCGATAAAGAAATCGAACGCGTCATCGAAATTTTAAACCGCCGCAATAAAAACAACCCGGTAT
TAATCGGGGAACCTGGCGTCGGGAAAACGGCGATCGTCGAAGGACTTGCCTTGAAAATTGCCGAAGGACAAGTTCCGGAA
AAACTGTTAAATAAAGAAGTGTATTTGCTTGACGTCGCTTCGCTTGTCGCCAACACGGGCATTCGCGGGCAATTTGAAGA
GCGCATGAAACGTCTTATCGCTGAACTGCAACAACGCAAAAACGTCATTCTCTTCATCGACGAAATTCACTTGCTCGTCG
GCGCCGGTTCGGCGGAAGGTTCAATGGACGCCGGCAACATTTTAAAACCAGCGCTGGCCCGCGGCGAATTGCAAGTCGTC
GGTGCGACAACATTGAAAGAATACCGACAAATTGAAAAAGACGCCGCGCTTGAACGCCGCTTCCAACCAGTGATCGTCCA
TGAGCCGACCGTCGAACAAGCAATCACGATTTTAAAAGGCATCCAGCCGAAATACGAGCAATTCCACCATGTCAAATATA
CGGATGAAGCGATTGAAGCATGCGTCAAATTGTCGCACCGCTACATTCAAGACCGCTTCTTGCCGGACAAAGCGATCGAC
TTGTTAGACGAAGCCGGCTCAAAAGCGAACTTGCGCATCGGTCCGACAGATGAAAAACAAATCCAAGAGCGCCTTGCGCA
AATCGCTAAAGAAAAAACAAAAGCAGTGAACGAAGAAAATTTCGAACTGGCAGCGAAATTGCGCGATGAAGAGCTGAAAT
TAGAAAAACAACTGCAAAACGGTGTAAATCAAGAGCGCCCTGTTGTCGATGTTGCCGATATCCAACGCATCATCGAAGAA
AAAACAGGCATTCCTGTCGGCAAACTGCAAGCTGATGAAAAAGAAAAAATGAAACATTTAGAAGAAAACTTGGCGAAAAA
AGTGATTGGCCAAGAAGAAGCGGTGAAAAAAGTGGCGAAAGCGATCCGCCGTAGCCGCGCGGGATTAAAAGCAAAACATC
GCCCAGTCGGTTCATTCTTATTCGTCGGTCCGACCGGCGTCGGAAAAACAGAGCTGGCGAAAACGCTCGCCGAAGAATTG
TTCGGCTCGAAAGACGCAATGATTCGCCTCGATATGAGCGAATATATGGAAAAACATTCGGTATCGAAATTAATCGGTTC
ACCTCCGGGCTATGTCGGTTTTGAGGAAGCCGGCCAGCTAACGGAAAAAGTGCGCCGCAATCCATACAGCATCATCTTGC
TTGACGAAATTGAAAAAGCGCACCCGGACGTGCAGCACATCTTCCTGCAAATTTTAGAGGACGGCCGTCTCACTGACAGC
CAAGGCCGCACCGTTAGCTTTAAAGACACGGTCATCATCGCGACAAGCAACGCCGGTGTTACCGATAAAAAAATTACGGT
TGGATTCGAAAAACAAGGAACAACGCACACAAGCGTTCTTGAGTCGTTAAACGCCTACTTCAAGCCGGAATTTTTGAACC
GTTTCGATGCGATCATCGAATTCAAACCGCTACAAAAAGAACATATGTTGCAAATCGTCGATCTGATGCTCCATGAAGTA
AAAGCGACATTGCGCGAACAACACATCGACCTTGACGTAACGCCAGCAGCGAAAGAAAAATTGGCGGAACTTGGCTACCA
TCCAGCGTTCGGTGCCCGTCCGCTCCGCCGCGTCATCCAAGAACATGTCGAAGATAAAATCGCTGACGTCTTGCTGGATG
AAAACGATCAAGTACAAGCGCTTCGCATCGATGTCGAAAATGACGCAATTGTCGCAAAAGCTTTGCATAAACAAACCGCC
TGA

Protein sequence :
MLCQVCQQNEATVFVNLQFNHEKKQMHLCHECYEKQKQELSIPMNFGFGGFSSFPFDDFFMDGFSPISEMGAPQPNTAQP
SHRNRKGGGFLDQFGRNLTQLAKAGLIDPVIGRDKEIERVIEILNRRNKNNPVLIGEPGVGKTAIVEGLALKIAEGQVPE
KLLNKEVYLLDVASLVANTGIRGQFEERMKRLIAELQQRKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVV
GATTLKEYRQIEKDAALERRFQPVIVHEPTVEQAITILKGIQPKYEQFHHVKYTDEAIEACVKLSHRYIQDRFLPDKAID
LLDEAGSKANLRIGPTDEKQIQERLAQIAKEKTKAVNEENFELAAKLRDEELKLEKQLQNGVNQERPVVDVADIQRIIEE
KTGIPVGKLQADEKEKMKHLEENLAKKVIGQEEAVKKVAKAIRRSRAGLKAKHRPVGSFLFVGPTGVGKTELAKTLAEEL
FGSKDAMIRLDMSEYMEKHSVSKLIGSPPGYVGFEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHIFLQILEDGRLTDS
QGRTVSFKDTVIIATSNAGVTDKKITVGFEKQGTTHTSVLESLNAYFKPEFLNRFDAIIEFKPLQKEHMLQIVDLMLHEV
KATLREQHIDLDVTPAAKEKLAELGYHPAFGARPLRRVIQEHVEDKIADVLLDENDQVQALRIDVENDAIVAKALHKQTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-166 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GY4MC1_2899 YP_003990201.1 ATPase AAA VFG0080 Protein 0.0 65
GY4MC1_2899 YP_003990201.1 ATPase AAA VFG0079 Protein 6e-166 54