Gene Information

Name : GY4MC1_0244 (GY4MC1_0244)
Accession : YP_003987704.1
Strain : Geobacillus sp. Y4.1MC1
Genome accession: NC_014650
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 274807 - 275586 bp
Length : 780 bp
Strand : -
Note : KEGG: gtn:GTNG_2609 ABC transporter ATP-binding protein; PFAM: ABC transporter; SMART: ATPase AAA

DNA sequence :
ATGCCCGAAACAAGCGGTGTAGCGCTAAGTATTCATCAATTGGAGAAATCGTTTGGCCATTTACACGTTTTACGCAAGAT
TGATTTGCAAATAGCCTCGGGGGAATTTGTGGCGATTGTCGGGAAAAGCGGTTGTGGAAAAAGCACATTACTTAGGCTCA
TTGCCGGGCTGGAAAAAGCAACTTCTGGAGAAATCAGGCAAAATGGAAAAACAATTAAGGAGTTAAATCCTCAAGCACGA
ATCATGTTCCAGGAAGCGCGTTTACTGCCTTGGAGATCGGTTCTTGAAAATGTCGGAGTTGGGCTTCGTCTCCAAAAAGA
TTGGAAGCAACGAGCAATTTGGGCATTGAAACAAGTCGGTCTAGAAGAACGGGCGCACGACTGGCCTTCCGTTTTATCAG
GGGGGCAAAAGCAACGAGTTTCGCTAGCAAGAGCGCTGGCCGCTCAACCGCAATTATTATTGCTGGATGAACCGTTAGGA
GCTTTGGATGCTTTAACTCGCATGGAAATGCAGGCACTGATTGAGGAGATTTGGCAGCAGCAAAAATTCACGGCATTATT
GGTTACCCATGATGTCAATGAAGCGATTACTTTAGCCGATCGTGTTGTTTTAATCGAAAAAGGAACGATAAAAATGGATT
TGCCAATTCCTCTCCCGAGACCCCGGAACCGGTCTGACTCCGCTTTTATCGAATTAGAAGAAAACGTTTTGGCACATGTA
TTGGAAAAAACATCATTGAAAAAGGAAACAGAGAATCTTAAAAGCGCCGCGAATGAATAG

Protein sequence :
MPETSGVALSIHQLEKSFGHLHVLRKIDLQIASGEFVAIVGKSGCGKSTLLRLIAGLEKATSGEIRQNGKTIKELNPQAR
IMFQEARLLPWRSVLENVGVGLRLQKDWKQRAIWALKQVGLEERAHDWPSVLSGGQKQRVSLARALAAQPQLLLLDEPLG
ALDALTRMEMQALIEEIWQQQKFTALLVTHDVNEAITLADRVVLIEKGTIKMDLPIPLPRPRNRSDSAFIELEENVLAHV
LEKTSLKKETENLKSAANE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-37 48
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-13 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-13 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-15 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-15 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GY4MC1_0244 YP_003987704.1 ABC transporter NC_012469.1.7686878. Protein 8e-17 41