Gene Information

Name : GY4MC1_0185 (GY4MC1_0185)
Accession : YP_003987648.1
Strain : Geobacillus sp. Y4.1MC1
Genome accession: NC_014650
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 205798 - 206589 bp
Length : 792 bp
Strand : -
Note : KEGG: afl:Aflv_1159 ferrichrome ABC transporter (ATP-binding protein); PFAM: ABC transporter; SMART: ATPase AAA; KH domain protein

DNA sequence : 
ATGGTTCGCCTGTACACGAAGGATTTAAATATTGGCTATCATGAACAGTTAATTGTGAAAAATTTGAACATCCAAATTCC
TGATCAAAAAATTACAGCCATTATCGGACCGAATGGCTGCGGCAAATCCACCCTCTTAAAAACATTGACGCGGATTATAA
CGCCTCAATCAGGAACAGTCGTTTTAGATGGAAAACAAATTTTCCATGAAAATACAAAAATCCTTGCAAGAAAGATGGCG
ATTCTTCCCCAAACACCGGAAAGTCCAGGCGGGCTGACAGTCGGAGAACTCGTTTCCTACGGCCGCTTTCCTTACCAAAA
AGGATTCGGACACTTAACGAAAAAAGATTATGAAGTCATTGATTGGGCGCTGGAGGTAACAGGGACGATCGAGTTTAAAT
ACCGCCCTGTCGATTCGCTGTCTGGCGGGCAACGCCAGCGTGTGTGGATCGCCATGGCTCTCGCACAAGAAACGGACATT
ATTTTCCTTGACGAACCGACTACTTATTTAGATATGGCCCATCAGCTTGAAGTATTGGAGCTATTGCAAAAACTGAACGT
TGAACAAGGCCGGACGATCGTCATGGTTCTCCATGATTTAAACCAAGCGGCCCGTTTCGCGGATTATATTATCGCTTTGA
AAGACGGAAAAATTGTGAAAGCCGGAAACGGCGACGAAGTGATGACACGTGATGTGCTCAAACAAGTATTTCATATTGAT
GCCGAAATCGGGCGAGACCCTCGGACGAACAAACCAATATGCCTGACATATCACTTACTGAAAGGAGAATAA

Protein sequence : 
MVRLYTKDLNIGYHEQLIVKNLNIQIPDQKITAIIGPNGCGKSTLLKTLTRIITPQSGTVVLDGKQIFHENTKILARKMA
ILPQTPESPGGLTVGELVSYGRFPYQKGFGHLTKKDYEVIDWALEVTGTIEFKYRPVDSLSGGQRQRVWIAMALAQETDI
IFLDEPTTYLDMAHQLEVLELLQKLNVEQGRTIVMVLHDLNQAARFADYIIALKDGKIVKAGNGDEVMTRDVLKQVFHID
AEIGRDPRTNKPICLTYHLLKGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-60 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-60 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-57 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-55 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-52 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-52 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-51 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-54 45
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-54 45
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-54 45
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-54 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GY4MC1_0185 YP_003987648.1 ABC transporter BAC0164 Protein 6e-52 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GY4MC1_0185 YP_003987648.1 ABC transporter VFG0925 Protein 3e-54 49
GY4MC1_0185 YP_003987648.1 ABC transporter VFG1042 Protein 6e-52 45