Gene Information

Name : GY4MC1_1967 (GY4MC1_1967)
Accession : YP_003989327.1
Strain : Geobacillus sp. Y4.1MC1
Genome accession: NC_014650
Putative virulence/resistance : Unknown
Product : alpha,alpha-phosphotrehalase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 1933331 - 1935019 bp
Length : 1689 bp
Strand : -
Note : TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; KEGG: gwc:GWCH70_1621 alpha,alpha-phosphotrehalase; SMART: alpha amylase catalytic sub domain

DNA sequence :
GTGCAGCATCCATGGTGGAAAAAAGCAGTCGTATATCAAATTTATCCAAAAAGCTTTAATGACACAAACGGTGACGGAAT
CGGTGATTTAGCGGGAATTATCGAAAAGCTCGATTATTTGAAACAACTCGGCGTGGATGTCATTTGGCTGACGCCGATTT
ACAAATCGCCGCAGCGTGACAATGGCTATGATATTAGCGACTATTTTCAAATTCACGATGAGTATGGGACGATGGAAGAT
TTTGACCGCTTGTTGGAAGAAGTGCATCGGCGCGGCATGAAATTAATCATGGATATGGTCGTCAACCATACGTCGACAGA
ACATGAATGGTTTAAGCAGGCGCGGACATCAAAAGACAATCCGTATCGTAATTTTTACATTTGGCGGGATCCAAAGCCGG
ATGGAAGCGCTCCGACGAACTGGCAGTCGAAGTTTGGCGGCTCGGCGTGGGAGTACGATGAGAAAACAGGTCAATATTAT
TTGCACTTGTTTGACGTGACACAAGCGGATTTAAACTGGGAAAACGAAGAGTTGCGCCGCCGCATTTATGATATGATGCA
TTTTTGGTTTCAAAAAGGCGTGGACGGCTTCCGTTTAGATGTTGTCAACTTGTTGTCTAAAGATCAACGTTTTCTCGATG
ACGACGGTTCGATGCCGCCGGGCGACGGCCGCAAGTTTTACACGGACGGGCCGCGCATCCATGAATTTTTGCATGAGATG
AACCAGGAAGTATTTTCGAAATACGATGTGATGACGGTTGGGGAAATGTCATCGACAACGATTGATCATTGCATTAAATA
CACCAATCCGGAACGCCGTGAATTGAATATGGTGTTTAATTTCCATCATTTAAAGGTGGATTATCCGAACGGGGAAAAAT
GGGCGGTCGCTGATTTCGATTTTCTTGCTTTGAAGCGAATTTTATCAGAATGGCAAGTAGAGATGCATAAAGGCGGCGGC
TGGAACGCGCTGTTTTGGTGCAACCATGACCAGCCGCGGATCGTGTCACGTTACGGCGATGATGGAAAATATCATAAAGA
ATCAGCGAAAATGCTTGCGACCGTCATTCATATGATGCAAGGGACGCCGTATATTTATCAAGGGGAAGAAATCGGCATGA
CCGATCCGAAATTTGAGCGGATTGACGATTACCGGGACGTGGAATCGCTCAATATGTATCACATTTTGCGAGAACAAGGA
AAAAGCGAGCAAGAAGTGCTTGAAATTTTAAAACGGAAGTCACGCGATAACTCACGGACGCCGATGCAATGGGACGACAG
CGAGAACGCCGGGTTCACGACAGGCAAGCCTTGGATTCGCGTCGCGCCGAACTATCAACAAATTAATGTGAAAAAAGCGC
TGGAAGATCCGACATCGGTTTTCTATCATTATCAGCGGCTCATTCAATTACGCAAACAATATGATATTATCACGACGGGA
GATTATCAGCTATTGCTTGAAGATCATCCGGATATTTTTGCCTATTTGCGAAACGGGGAGAATGAAAAGCTGCTTGTTGT
GAATAATTTTTACGGAAGGGAAACGACGTTCATCTTGCCGGATGATGTTGCTGTAAACGGCTATGCGAGCGAAATATTAA
TTTCTAACTATGATGACTCACCGAGCGATTTTCGAAAAATAACGCTTCGCCCGTATGAATCGATTGTTTATTACTTGACA
AAATCATGA

Protein sequence :
MQHPWWKKAVVYQIYPKSFNDTNGDGIGDLAGIIEKLDYLKQLGVDVIWLTPIYKSPQRDNGYDISDYFQIHDEYGTMED
FDRLLEEVHRRGMKLIMDMVVNHTSTEHEWFKQARTSKDNPYRNFYIWRDPKPDGSAPTNWQSKFGGSAWEYDEKTGQYY
LHLFDVTQADLNWENEELRRRIYDMMHFWFQKGVDGFRLDVVNLLSKDQRFLDDDGSMPPGDGRKFYTDGPRIHEFLHEM
NQEVFSKYDVMTVGEMSSTTIDHCIKYTNPERRELNMVFNFHHLKVDYPNGEKWAVADFDFLALKRILSEWQVEMHKGGG
WNALFWCNHDQPRIVSRYGDDGKYHKESAKMLATVIHMMQGTPYIYQGEEIGMTDPKFERIDDYRDVESLNMYHILREQG
KSEQEVLEILKRKSRDNSRTPMQWDDSENAGFTTGKPWIRVAPNYQQINVKKALEDPTSVFYHYQRLIQLRKQYDIITTG
DYQLLLEDHPDIFAYLRNGENEKLLVVNNFYGRETTFILPDDVAVNGYASEILISNYDDSPSDFRKITLRPYESIVYYLT
KS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 8e-144 52