Gene Information

Name : GY4MC1_0013 (GY4MC1_0013)
Accession : YP_003987480.1
Strain : Geobacillus sp. Y4.1MC1
Genome accession: NC_014650
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0172
EC number : -
Position : 21966 - 23240 bp
Length : 1275 bp
Strand : +
Note : KEGG: gwc:GWCH70_0014 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like

DNA sequence :
ATGCTCGATGTGAAGTATTTGCGCAATCATTTTCAAGAAGTGAAAGAAAGAATTCAAAAGCGCGGCGGAGATTTAGCGAA
TATGGACCGTTTTGCAGAGCTCGACAAAAAGCGCCGCGAATTAATCGCAAAAGCAGAAGAACTAAAAAATAAAAGAAATG
AAGTATCCCAACAAATCGCTGTGTTAAAGCGGGAGAAAAAAGATGCCAATCATCTTATTGCCGAGATGCGGGAAGTAGGG
GATCGCATTAAAGCAATGGATGATGAAATCCGGCAAGTGGAAGAAGAATTAAATGCGCTGTTATTGTCCATTCCAAACAT
CCCGCATGAATCGGTACCTGTCGGTAAGTCGGAAGAAGATAATGTCGAAGTCCGCAAATGGGGAGAGCCGCGTTCATTTT
CGTTTGAGCCGAAACCGCACTGGGATATCGCCGATCAGCTCGGTATTCTTGATTTTGAACGGGCTGCGAAAGTGACGGGA
AGCCGCTTTGTCTTTTATAAAGGACTTGGTGCCCGCCTAGAGCGCGCGTTAATTAACTTTATGCTTGATGTTCATATCGA
AGAGTTTGGCTATCAAGAAATATTGCCTCCATATCTTGTTAATCGGGCGAGCATGACAGGGACAGGACAACTGCCAAAGT
TTGAAGAAGACGCATTTCGCATTGAAACAGAGGATTACTTTTTAATTCCGACGGCAGAAGTGCCTGTGACCAATTTGCAT
CGCGATGAAATTTTATCGGCGGAAGATTTGCCGATTTACTATGCTGCTTACAGCGCGTGTTTCCGCGCCGAAGCCGGCGC
TGCTGGACGTGATACAAGAGGGCTTATTCGCCAGCATCAATTTAATAAAGTAGAACTTGTGAAATTTGTAAAACCGGAAG
ATTCGTATGATGAATTAGAAAAATTGACCAATCAAGCGGAGAGAATTTTGCAGCTTCTTGGGCTTCCTTATCGGGTTGTA
TGTTTATGTACCGGTGATTTAGGATTTGCGGCGGCGAAAACGTATGATATTGAAGTATGGCTGCCAAGTTATGGAACGTA
TCGTGAGATTTCTTCTTGCAGCAATTTTGAAGCGTTCCAAGCACGGCGTGCTAATATTCGTTTCCGCCGTGAACCAAAAT
CAAAGCCGGAATATGTCCATACACTCAACGGATCAGGATTGGCCATTGGCCGCACAGTAGCTGCCATTTTAGAAAATTAC
CAGCAAGAGGATGGCACCGTTGTCATTCCGGAAGTATTGCGCCCGTACATGGGAAATCGAGAAGTTATTCGATAA

Protein sequence :
MLDVKYLRNHFQEVKERIQKRGGDLANMDRFAELDKKRRELIAKAEELKNKRNEVSQQIAVLKREKKDANHLIAEMREVG
DRIKAMDDEIRQVEEELNALLLSIPNIPHESVPVGKSEEDNVEVRKWGEPRSFSFEPKPHWDIADQLGILDFERAAKVTG
SRFVFYKGLGARLERALINFMLDVHIEEFGYQEILPPYLVNRASMTGTGQLPKFEEDAFRIETEDYFLIPTAEVPVTNLH
RDEILSAEDLPIYYAAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFVKPEDSYDELEKLTNQAERILQLLGLPYRVV
CLCTGDLGFAAAKTYDIEVWLPSYGTYREISSCSNFEAFQARRANIRFRREPKSKPEYVHTLNGSGLAIGRTVAAILENY
QQEDGTVVIPEVLRPYMGNREVIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 1e-132 62