Gene Information

Name : GY4MC1_1541 (GY4MC1_1541)
Accession : YP_003988934.1
Strain : Geobacillus sp. Y4.1MC1
Genome accession: NC_014650
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1509515 - 1510330 bp
Length : 816 bp
Strand : +
Note : KEGG: gwc:GWCH70_1984 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA

DNA sequence : 
ATGAACGCCTTACAAGCAAAAGGGTTAACATTATCATATGGAAACACGATCATTATCGATGAGCTGGATTTAATGATTCC
AAAAGGAGAAATTACCGTATTTATCGGGGGAAACGGCTGCGGCAAATCGACGCTGCTTCGCGCTTTGGCACGGCTTTTGA
AGCCGGCAGGCGGTTCCGTTTTACTAGAAGGAAAAGAAATCGCGACATTGCCGACAAAAGAAGTGGCGAAAAAACTGGCG
ATTTTGCCGCAATCACCGACAGCTCCGGAAGGATTGACGGTACTGCAGCTTGTTAAACAGGGGCGGTATCCGTATCAGAC
GTGGTTAAAACAATGGAGTGAAGAAGACGAACAAGCGGTGCGGCGCGCGCTCGAAGCGACAAGAATGACAGAATTAGCGG
AACGCCCGGTCGATTCGCTTTCGGGGGGGCAGCGGCAGCGCGCTTGGCTCGCGATGACATTAGCGCAAGATACGGACATT
ATCTTATTGGACGAACCAACCACCTATTTGGATATGACGCACCAGATTGAAATTCTTGATTTATTGTTTGAGCTAAACGA
GAAAGAAAAACGCACGATTGTCATGGTGCTCCATGATCTTAACTTGGCGTGCCGCTATGCCCATCATATCGTTGCAATTC
GCGATAAAAAAATATATGCGCAAGGAAAGCCGGAAGAAATCATTTCCTGTCAACTTGTGAAAGACGTATTTCAAATGGAC
TGTCAAGTGACATATGATCCATTATTTGGCACTCCGCTCTGTATTCCGTACGGAAAAGGAAGATGTCTTTTGCAGAAAGA
AGGAGTCCCGTCATGA

Protein sequence : 
MNALQAKGLTLSYGNTIIIDELDLMIPKGEITVFIGGNGCGKSTLLRALARLLKPAGGSVLLEGKEIATLPTKEVAKKLA
ILPQSPTAPEGLTVLQLVKQGRYPYQTWLKQWSEEDEQAVRRALEATRMTELAERPVDSLSGGQRQRAWLAMTLAQDTDI
ILLDEPTTYLDMTHQIEILDLLFELNEKEKRTIVMVLHDLNLACRYAHHIVAIRDKKIYAQGKPEEIISCQLVKDVFQMD
CQVTYDPLFGTPLCIPYGKGRCLLQKEGVPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-57 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-57 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-57 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-54 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-54 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-54 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-54 48
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-50 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-47 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 3e-47 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GY4MC1_1541 YP_003988934.1 ABC transporter BAC0164 Protein 5e-50 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GY4MC1_1541 YP_003988934.1 ABC transporter VFG0925 Protein 1e-59 52
GY4MC1_1541 YP_003988934.1 ABC transporter VFG1042 Protein 5e-50 46