Gene Information

Name : GY4MC1_1403 (GY4MC1_1403)
Accession : YP_003988815.1
Strain : Geobacillus sp. Y4.1MC1
Genome accession: NC_014650
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1366810 - 1367484 bp
Length : 675 bp
Strand : +
Note : KEGG: transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein

DNA sequence :
ATGAATCATCGTGTTTTAATCATTGAAGATGAAGCGAATTTGGCGCGATTTATTGAGCTTGATTTGACCCATGAAGGATA
TGAGGTGCGTGTAAGCCATGATGGCAGGGAAGGCCTGGAATTGGCGTTGTCGGAAGAGTGGGGGCTTATTTTATTGGATG
TCATGCTTCCAAGTCTGAACGGAATGGAAGTATGCCGCCGCATTCGTGCGGTAAAGCAAACTCCGATCATTATGATTACG
GCAAGAGACAGTGTGTTTGACCGTGTGATGGGTTTGGATAATGGCGCGGATGACTATATTGTCAAGCCATTTGCGATCGA
AGAGTTGCTTGCGCGGATTCGCGCGCTATTTCGCCGCGTTCATGCTCCCGCGGAAGAACGTTTGCTGACGTTTAAAGATT
TAACGGTGGACTTGGACGCCCGCACTGTAAAAAAAGGAAATCAATTCATTGAATTAACAAAGCGGGAATACGATTTATTA
GTGACGTTTTTGCAAAATACGAATATTGTTTTAACCCGTGACACATTATTAGATAAAGTATGGGGATTTGACACAGAGGT
GGAAACGAACGTCGTTGATGTATATGTCCGCTATTTGCGCCATAAACTCGATGAAACGGATAAAGAGCGTTATATCCAAA
CAGTGCGGGGCGCTGGATATGTGATGCGGTCATGA

Protein sequence :
MNHRVLIIEDEANLARFIELDLTHEGYEVRVSHDGREGLELALSEEWGLILLDVMLPSLNGMEVCRRIRAVKQTPIIMIT
ARDSVFDRVMGLDNGADDYIVKPFAIEELLARIRALFRRVHAPAEERLLTFKDLTVDLDARTVKKGNQFIELTKREYDLL
VTFLQNTNIVLTRDTLLDKVWGFDTEVETNVVDVYVRYLRHKLDETDKERYIQTVRGAGYVMRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-37 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-37 44
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-36 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GY4MC1_1403 YP_003988815.1 transcriptional regulator HE999704.1.gene1528. Protein 2e-71 68
GY4MC1_1403 YP_003988815.1 transcriptional regulator AE015929.1.gene1106. Protein 4e-53 57
GY4MC1_1403 YP_003988815.1 transcriptional regulator NC_013450.8614146.p0 Protein 1e-56 56
GY4MC1_1403 YP_003988815.1 transcriptional regulator NC_002951.3238224.p0 Protein 1e-56 56
GY4MC1_1403 YP_003988815.1 transcriptional regulator NC_007793.3914065.p0 Protein 1e-56 56
GY4MC1_1403 YP_003988815.1 transcriptional regulator NC_002758.1121390.p0 Protein 1e-56 56
GY4MC1_1403 YP_003988815.1 transcriptional regulator NC_010079.5776364.p0 Protein 1e-56 56
GY4MC1_1403 YP_003988815.1 transcriptional regulator NC_002952.2859858.p0 Protein 1e-56 56
GY4MC1_1403 YP_003988815.1 transcriptional regulator NC_007622.3794948.p0 Protein 1e-56 56
GY4MC1_1403 YP_003988815.1 transcriptional regulator NC_003923.1003417.p0 Protein 1e-56 56
GY4MC1_1403 YP_003988815.1 transcriptional regulator BAC0308 Protein 5e-39 44
GY4MC1_1403 YP_003988815.1 transcriptional regulator BAC0125 Protein 2e-38 44
GY4MC1_1403 YP_003988815.1 transcriptional regulator BAC0197 Protein 2e-35 43
GY4MC1_1403 YP_003988815.1 transcriptional regulator NC_012469.1.7685629. Protein 5e-39 42
GY4MC1_1403 YP_003988815.1 transcriptional regulator BAC0111 Protein 1e-37 42
GY4MC1_1403 YP_003988815.1 transcriptional regulator CP001485.1.gene721.p Protein 2e-31 41
GY4MC1_1403 YP_003988815.1 transcriptional regulator BAC0638 Protein 4e-35 41
GY4MC1_1403 YP_003988815.1 transcriptional regulator AE000516.2.gene3505. Protein 8e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GY4MC1_1403 YP_003988815.1 transcriptional regulator VFG1390 Protein 4e-47 47
GY4MC1_1403 YP_003988815.1 transcriptional regulator VFG0596 Protein 8e-38 44
GY4MC1_1403 YP_003988815.1 transcriptional regulator VFG1389 Protein 1e-37 43
GY4MC1_1403 YP_003988815.1 transcriptional regulator VFG1563 Protein 2e-36 41
GY4MC1_1403 YP_003988815.1 transcriptional regulator VFG1702 Protein 1e-36 41