Gene Information

Name : GY4MC1_1260 (GY4MC1_1260)
Accession : YP_003988677.1
Strain : Geobacillus sp. Y4.1MC1
Genome accession: NC_014650
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 1245311 - 1246396 bp
Length : 1086 bp
Strand : +
Note : TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: gwc:GWCH70_2239 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
GTGCGAAACGATGAACAATATATGCGCCTGGCGATCGAAATGGCGAAAGCGGGGATCGGGCAGACGTCTCCTAATCCGAT
TGTTGGCGCTGTCGTTGTTAACAGTGGAGAAATTGTCGGATTTGGCGCGCATTTGAAAGCGGGGGAGCCGCATGCGGAAG
TGCATGCCATCCGGATGGCGGGAGAAAAAGCGAAAGGGGCGACCGTGTATGTGACGCTGGAGCCATGCAGCCATTATGGA
AAAACGCCCCCTTGCGCCGATTTATTAATTGATGCGGGCGTCCGGCGCGTTGTTATTGCGACGACAGACCCGAACCCGCT
CGTAGCGGGCAAAGGCATCGAAAAGCTAAGGAATGCGGGAATCGATGTAAAGCTTGGGGTGCTGAAAGAAGAAGCGGATG
AGTTAAATCGCGTGTTTTTCCATTACATTGCGACAAAAACGCCATTTGTGACGCTAAAATACGCGAGCAGCCTCGATGGA
AAAATCGCCACGGCAACAGGGGAAAGCAAATGGATCACATCGGAAGCGGCTAGGGAAGATGTGCATCGTTACCGGGCGGT
GCATGATGCAATTCTCGTCGGGGTGGACACCGTCATTGCCGATAACCCAAGCTTAACGGTAAGGCTTCCGGGCAGCGGAA
AGAATCCGATTCGCATCGTTTTAGATACGCATTTGCGCACACCCCTTGAGGCAAACATTCTCCAAGATGGACAAGCGGAA
ACGTGGCTGATTGCCGGCAGCGGGGTCAGCGGCGAAAAAAAGAAGCGATATGAGAGCAAAAACGTGCAAGTAATTTCTAT
GAGCACGCCGCATATTAACATCGATGAATTGCTGCACGTGCTTGGCGAGAGACGGATTACTTCCCTTTTTGTCGAAGGCG
GGTCACGCGTGCACGATAGTTTTGTGCGCGCTGGAGCGGTTAACGAAATTGTCGCATATTTTGCTCCGAAGCTCATCGGC
GGAAAACAAGCACCGACGCCGATCGGGGGGATAGGTTTTGCCAGCATGGCCGACGTGATGCAGCTGCAAATCCGGCGAGT
CGAAACGATCGGCCCGGATATCAAAATCGTCGCGATACCAAAATAA

Protein sequence :
MRNDEQYMRLAIEMAKAGIGQTSPNPIVGAVVVNSGEIVGFGAHLKAGEPHAEVHAIRMAGEKAKGATVYVTLEPCSHYG
KTPPCADLLIDAGVRRVVIATTDPNPLVAGKGIEKLRNAGIDVKLGVLKEEADELNRVFFHYIATKTPFVTLKYASSLDG
KIATATGESKWITSEAAREDVHRYRAVHDAILVGVDTVIADNPSLTVRLPGSGKNPIRIVLDTHLRTPLEANILQDGQAE
TWLIAGSGVSGEKKKRYESKNVQVISMSTPHINIDELLHVLGERRITSLFVEGGSRVHDSFVRAGAVNEIVAYFAPKLIG
GKQAPTPIGGIGFASMADVMQLQIRRVETIGPDIKIVAIPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 9e-60 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 9e-60 43