Gene Information

Name : GY4MC1_1242 (GY4MC1_1242)
Accession : YP_003988660.1
Strain : Geobacillus sp. Y4.1MC1
Genome accession: NC_014650
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1229197 - 1230096 bp
Length : 900 bp
Strand : +
Note : KEGG: gwc:GWCH70_2257 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; tyrosine recombinase XerC; PFAM: integrase; integrase

DNA sequence : 
ATGTTGGAACATGAATTGAAAGATTTTCTTCATTATTTGACGGTAGAACGAAATTTGGCGAAAAATACAATTGTTTCTTA
TGAAAGAGATTTAAAAAAATATGCGCACTATTTGCGCCATGTGGAGCAAATTCAATCATGGAACGACGTGTCGCGCCTCC
ATATTATGCAATTTTTAAAGTTTTTGAAAGAAAAAGGAAGCTCTCCGAAGACGATCGCGCGCCATATTGCGTCGATTCGC
TCGTTTCATCAATTTCTTCTTCGTGAAAAAATAGCAGACCAAGATCCGTCGGTGCATATCGAATCGCCGCAAATGGAGCG
GACGTTGCCGAAAGTGCTGTCCTTGGAAGAGGTGGAGGCGCTCTTAGAAGCGCCGAAAACAAATACGCCAATCGGCATTC
GTGACAAAGCGATGATAGAATTGTTGTATGCGACGGGAATGCGCGTCAGCGAACTCGTAAATTTAAATCTTTCCGACGTG
CATTTGACAATGGGCTTTGTCCGCTGCTACGGAAAAGGAAACAAGGAGCGGATCGTTCCGATCGGCAGCATGGCGCTGGA
CGCGTTAAAAGCATATCTGGAAACAGCGCGTCCAAAATTAATAAATCCGAAAAAGCGGGCAACCGATGCGCTGTTTTTGA
ATCATTATGGGGATCGCTTAACGAGGCAAGGGTTTTGGAAGATTTTAAAAAAGCTTGCAAAAGAAGCAAACATCGAAAAA
GAACTGACGCCGCACACGCTGCGGCATTCATTTGCCACACATCTGCTCGAAAACGGCGCCGATTTGCGCGCCGTGCAAGA
ACTGTTAGGCCATGCCGATATTTCGACGACGCAAATTTATACTCATGTTACGAAAACGCGTTTAAAAGATGTATATAAGC
AATTTCATCCACGCGCATAG

Protein sequence : 
MLEHELKDFLHYLTVERNLAKNTIVSYERDLKKYAHYLRHVEQIQSWNDVSRLHIMQFLKFLKEKGSSPKTIARHIASIR
SFHQFLLREKIADQDPSVHIESPQMERTLPKVLSLEEVEALLEAPKTNTPIGIRDKAMIELLYATGMRVSELVNLNLSDV
HLTMGFVRCYGKGNKERIVPIGSMALDALKAYLETARPKLINPKKRATDALFLNHYGDRLTRQGFWKILKKLAKEANIEK
ELTPHTLRHSFATHLLENGADLRAVQELLGHADISTTQIYTHVTKTRLKDVYKQFHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-52 46
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-52 46