Gene Information

Name : GY4MC1_0082 (GY4MC1_0082)
Accession : YP_003987549.1
Strain : Geobacillus sp. Y4.1MC1
Genome accession: NC_014650
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 104704 - 107142 bp
Length : 2439 bp
Strand : +
Note : KEGG: gwc:GWCH70_0083 ATPase AAA; PFAM: ATPase AAA; ATPase AAA; UvrB/UvrC protein; Clp domain protein; Clp ATPase-like; SMART: ATPase AAA

DNA sequence :
ATGATGATGTTTGGAAGATTTACGGAACGGGCGCAAAAAGTGTTGGCGCTGGCTCAAGAAGAGGCAATACGCCTTGGCCA
TAATAACATTGGCACAGAACACATTTTATTAGGTCTTATTCGTGAAGGGGAAGGAATTGCGGCGAAAGCATTAATGGCAT
TGGGGCTTGGGCCAGAAAAAATTCAAAAAGAGGTAGAATCGTTAATCGGCCGCGGCCATGAAGTTTCCCATACGATCCAT
TATACGCCGCGGGCGAAAAAAGTGCTTGAATTGTCAATGGATGAGGCGAGAAAGCTTGGCCATTCCTATGTAGGCACGGA
ACATATTTTGCTTGGCCTCATTCGTGAAGGCGAAGGAGTTGCGGCCCGCGTACTGAACAATTTAGGAGTGAGCCTGAATA
AAGCGCGCCAACAAGTGCTGCAATTGCTTGGAAGCAATGAATCCGTTTCCGGTCATTCCGGAGGAGGTGCTTCGCACGTA
AGCACACCAACATTAGACAGCTTGGCCCGTGATTTAACGGCAATTGCCCGTGAAGGTAGATTGGACCCGGTTGTTGGTAG
AAGCAAAGAAATTCAGCGTGTCATCGAAGTATTAAGCCGCCGTACAAAAAATAACCCGGTGCTAATCGGAGAGCCTGGAG
TTGGGAAAACGGCGATTGCTGAAGGGCTTGCGCAGCAAATCATCAATAACGAAGTGCCGGAAACGCTCCGCGATAAGCGG
GTCATGACGCTGGACATGGGAACGGTTGTAGCCGGTACGAAATACCGCGGGGAATTTGAAGATCGTTTGAAAAAAGTGAT
GGATGAAATTCGCCAGGCAGGAAACATCATTCTCTTCATTGATGAGCTCCATACGCTTATTGGCGCAGGTGGAGCGGAAG
GTGCGATTGATGCATCGAACATCTTGAAGCCAGCGCTTGCGCGTGGGGAACTGCAATGCATCGGTGCGACTACATTGGAC
GAATATCGGAAATATATTGAAAAAGATGCGGCGCTTGAACGCCGTTTCCAACCGATTTATGTCGATGAGCCGACAGTAGA
AGAATCGATTCAAATTTTGAAAGGATTGCGTGATCGCTATGAAGCCCATCATCGCGTATCTATTTCCGATGATGCGATCG
TTCAGGCGGTAAAATTATCTGACCGTTATATTACCGACCGTTTTCTTCCAGATAAAGCGATCGATTTAATCGATGAAGCA
TGCTCGAAAGTTCGCCTGCGTTCGTTTACGGCGCCGCCAAAATTAAAAGAGCTCGAACAAAAACTGGAAGAAGTGCGTAA
GGAAAAAGACGCCGCTGTACAAAGCCAAGAATTTGAAAAAGCTGCTTCGCTGCGCGACATGGAGCAACGCTTACGCGAAG
AACTCGAAGAAACGAAACGCGCGTGGAAAGAAAAACAAGGCCAAGAAAACTCAGAGGTAACGGTTGAGGACATCGCGATG
GTCGTTTCAAGCTGGACTGGAATTCCAGTAGCGAAATTAGCGCAGACGGAAACAGAACGATTATTGAAACTAGAAGAAAT
TTTACATTCCCGCGTCGTTGGTCAAGACGAAGCAGTAAAAGCAGTTGCCAAAGCGGTCCGTCGCGCGCGCGCTGGATTAA
AAGACCCGAAACGTCCTATTGGATCGTTCATTTTCCTTGGTCCAACTGGTGTCGGCAAAACCGAATTGGCAAGAGCGCTT
GCCGAAGCGATGTTCGGCGATGAAGACGCACTTATTCGCATCGATATGTCTGAATATATGGAGAAGCACTCGACATCTCG
TTTGATTGGTTCGCCTCCTGGATATGTTGGGTACGAGGAAGGCGGCCAGCTAACAGAAAAAGTGCGCCGCAAGCCGTATT
CGGTTGTGTTGTTAGATGAGATGGAAAAAGCCCATCCAGACGTATTTAACATTTTGTTGCAAGTGTTGGAAGACGGTCGT
TTGACTGACTCGAAAGGAAGAACGGTTGACTTCCGCAATACGATTATCATTATGACGTCCAACGTTGGCGCAGATGCGTT
AAAGCGGAACAAATACGTCGGTTTTAACGTCCAAGATGAAGATCAAAAGTACAAAGATATGAAAGGAAAGGTCATGGACG
AGTTAAAGAGAGCATTCCGCCCAGAGTTTTTAAACCGCATTGATGAAATTATCGTCTTCCATTCGCTTGAAAAACAACAT
TTAAAACAAATTGTCAAATTGATGGCAGACACGTTGATCAAACGTTTAAAAGAACAAGATATCGATTTAGAACTGACGGA
TGCGGCGATTGAAAAAATTGTCTCGGAAGGATATGATCCGGAATATGGTGCTCGCCCATTGCGCCGCGCGTTGCAAAAAC
AGGTGGAAGATCGTTTGTCGGAAGAGCTGTTGAAAGGAACGATTGCCAAAGGGCAAAAAGTGATCGTAGACGTAAAAGAC
GGGGAATTCGTCGTTTTAGCGAAACAAGCTGTGATGTAA

Protein sequence :
MMMFGRFTERAQKVLALAQEEAIRLGHNNIGTEHILLGLIREGEGIAAKALMALGLGPEKIQKEVESLIGRGHEVSHTIH
YTPRAKKVLELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESVSGHSGGGASHV
STPTLDSLARDLTAIAREGRLDPVVGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKR
VMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLD
EYRKYIEKDAALERRFQPIYVDEPTVEESIQILKGLRDRYEAHHRVSISDDAIVQAVKLSDRYITDRFLPDKAIDLIDEA
CSKVRLRSFTAPPKLKELEQKLEEVRKEKDAAVQSQEFEKAASLRDMEQRLREELEETKRAWKEKQGQENSEVTVEDIAM
VVSSWTGIPVAKLAQTETERLLKLEEILHSRVVGQDEAVKAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAL
AEAMFGDEDALIRIDMSEYMEKHSTSRLIGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEMEKAHPDVFNILLQVLEDGR
LTDSKGRTVDFRNTIIIMTSNVGADALKRNKYVGFNVQDEDQKYKDMKGKVMDELKRAFRPEFLNRIDEIIVFHSLEKQH
LKQIVKLMADTLIKRLKEQDIDLELTDAAIEKIVSEGYDPEYGARPLRRALQKQVEDRLSEELLKGTIAKGQKVIVDVKD
GEFVVLAKQAVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GY4MC1_0082 YP_003987549.1 ATPase AAA VFG0079 Protein 0.0 78
GY4MC1_0082 YP_003987549.1 ATPase AAA VFG0080 Protein 2e-145 53