Gene Information

Name : GY4MC1_0941 (GY4MC1_0941)
Accession : YP_003988366.1
Strain : Geobacillus sp. Y4.1MC1
Genome accession: NC_014650
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 953533 - 955203 bp
Length : 1671 bp
Strand : +
Note : KEGG: gwc:GWCH70_2562 type II secretion system protein E; PFAM: type II secretion system protein E; general secretory system II protein E domain protein; SMART: ATPase AAA

DNA sequence :
ATGAAGAAAAAACAAGAGCGGAAACGTTTAGGAGATTTATTAGTGGAAGCGGGGCTCATTACGGAGGAACAGCTGGAGGA
AGCGTTAAGAGAAAAAGCTCCCGGCCAAAAGCTGGGCGATGTGCTGTTGCAGCTCGGGTATATTACCGAGCAGCAATTAA
TTGAAGTGCTTGAGTTTCAATTAGGCATCCCGCATGTCAGCTTGTACCGCTATCCGATCGATCCGAAGCTGACCAACCTC
ATTCCGAAAGAATTTGCCAAGCGGCATATGGTGATGCCTTTAAAAGTTGAGGGAGAACGCTTGCTTGTGGCAATGGCCGA
TCCGATGGACTTTTTTGTCATCGATGATTTGCGCCTTTCGACAGGGTTCCATATTGAAACGGCGATTGCCTCAAAAGATG
ATATTTTGCGCGCCATTAATAAGTATTACGACATGGATGAATCAGTAGAAGATTTTTTGCAAATGGCCCCCGCCGCGGAA
ACAACGGTGGAAGAGGAACGGGCGACCGAAGAAGATTCCCCGATTGTCCGGCTTGTGAACCAAATTTTGCAGCTCGCCGT
TGAACAGCGGGCAAGCGATGTCCACATCGACCCGCAGGAAACGAAAGTGCTTGTCCGTTATCGCATCGACGGTATATTGC
GGACAGACCGCGCCCTTCCAAAACATATGCAAAGCATGCTGACCGCGAGAATTAAAATTTTAGCGAATATGGATATTACC
GAACACCGCATTCCGCAAGATGGCCGGATTAAGATGAACATCGATTTTCATCCGGTCGATTTGCGCGTTTCTACATTGCC
GACCATCTATGGCGAAAAAATCGTGATCCGCATTCTTGATTTAGGGACGGCGCTGAACGATATTCATAAGCTTGGGTTTA
ACCAGTTAAATTTGCGGCGCTTTATTGAACTTATTGAAAGGCCGAACGGAATCATTCTGATTACCGGGCCGACTGGGGCA
GGAAAATCATCGACGCTATATGCGGCGCTGAACCATTTAAACAGTGAAGAAGTCAATATTATTACGATCGAAGACCCTGT
CGAATATCAGATTGAAGGAGTCAATCAAATCCAAGTGAATCCGAATATCGGATTGACGTTTGCGCAAGGGCTGCGTTCGA
TTTTGCGGCAAGACCCAAACATTATTATGGTGGGAGAAATCCGCGACCGCGAAACGGCAGAAGTGGCGATCCGCGCGTCA
TTGACCGGCCATTTAGTGTTAAGCACCTTGCATACAAACGATGCGTTAAGCACCATCACACGCTTAATTGATATGGGGAT
TGAGCCGTTTCTTGTGGCGACCTCTTTAGCCGGCGTCGTTTCCCAGCGGCTCGTCCGCCGCGTCTGCCGCGATTGCCAAG
AAGAGCAGGAGCCAACGAAAAGGGAAATCGAGATTTTTGCCCGCCGCGGCATGAAAATTGACAAGCTGATCCGCGGCCGC
GGCTGCCCGACATGCAATATGACAGGCTATAAAGGGCGGATTGCCATTCATGAACTGCTTGTGATGACCGATGAAATGCG
CCGCGTCATTTTAAATAAAGAGCCATTTTCGAAATTGCGCGAGCTTGCCATAAAAAACCGCATGATTTTTTTGATTGATG
ACGGATTGTTAAAAGTGAAACAAGGGTTAACGACGCTGGAAGAGGTATTGAAAGTGGCGATTTTAAGTTAA

Protein sequence :
MKKKQERKRLGDLLVEAGLITEEQLEEALREKAPGQKLGDVLLQLGYITEQQLIEVLEFQLGIPHVSLYRYPIDPKLTNL
IPKEFAKRHMVMPLKVEGERLLVAMADPMDFFVIDDLRLSTGFHIETAIASKDDILRAINKYYDMDESVEDFLQMAPAAE
TTVEEERATEEDSPIVRLVNQILQLAVEQRASDVHIDPQETKVLVRYRIDGILRTDRALPKHMQSMLTARIKILANMDIT
EHRIPQDGRIKMNIDFHPVDLRVSTLPTIYGEKIVIRILDLGTALNDIHKLGFNQLNLRRFIELIERPNGIILITGPTGA
GKSSTLYAALNHLNSEEVNIITIEDPVEYQIEGVNQIQVNPNIGLTFAQGLRSILRQDPNIIMVGEIRDRETAEVAIRAS
LTGHLVLSTLHTNDALSTITRLIDMGIEPFLVATSLAGVVSQRLVRRVCRDCQEEQEPTKREIEIFARRGMKIDKLIRGR
GCPTCNMTGYKGRIAIHELLVMTDEMRRVILNKEPFSKLRELAIKNRMIFLIDDGLLKVKQGLTTLEEVLKVAILS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 1e-87 47
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 9e-88 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GY4MC1_0941 YP_003988366.1 type II secretion system protein E VFG1876 Protein 3e-86 44
GY4MC1_0941 YP_003988366.1 type II secretion system protein E VFG0112 Protein 5e-87 41