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Name : HMPREF0421_20893 (HMPREF0421_20893) Accession : YP_003985998.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Virulence Product : PTS system transporter subunit IIC Function : - COG functional category : S : Function unknown COG ID : COG3037 EC number : - Position : 1093494 - 1094927 bp Length : 1434 bp Strand : - Note : COG: COG3037; Pfam: PF04215; InterPro: IPR007333 DNA sequence : ATGCCAAAATCAGCTCACATATTAATAAAAATATATAAGGAGAGAACTATGAACGGTGTTCTGTCTATACTGCTAGATGT TTTTAGACAACCATCTGTAATAGTTGCAATGATTTCTCTAATTGGTCTTGCAGTACAAGGCAAAAAGATTTCCGACATAG TACAAGGCTCTATTCGTACAATGATTGGTTTCTTAGTATTGGCAGCCGGATCTGGAGTAGTCACTGAAGCACTAAATCCT TTTGGGAGCATGTTCCAATATGCGTTCCATGTTCAAGGCGTAGTACCAAATAATGAAGCTATAATCGGTACAGTTCTTAT GAAGTATGGATCAGAAGCAGCATTAATCTTCTTCTTTGGAATGATTGTTAACATTGTTTTATCAATAACATCTAGATTTA AGTTCATTTACTTAACTGGTCACGTTGCATTCTATATGGCAAGTATGCTCGCAGTAATCTTCAATGTCGCAGGTTTTGAT ACTCTAACCGTTATTATTCTCGGATCATTCGCTCAAGGTTTACTTATTACGATTTCTCCAGCATTGGTTCAGTCATTTAT GCGCACTGCTTCCGGCAAAGATGATGTTGCACTTGGACATCCTACGAGTAGTGGAGTTCTTATTGGAACTTTGATTGCAA AACTTACAGCTTCTAAAAAGCATCCGTCTAAGTCTACTGAAGATATTAAGTTCCCAGCTGCTCTTGGATTCTTAAAAGAT ACAACTGTTCTCATTGCACTTTCAATGGCAATTATCTACGCTGTTGTAGCACTTTTTGCGGGGCCGCAATATATTGAATC GCATTTATCTAATGGGCAAAACTTTATTGTGTTTGTTATTCTTAAGGCTGCAATGTTCTCTGCAGGCGTTTTCATTATTC TTGCAGGCGTACAGGTTGTTTTAGATGAGATTGTTCCAGCATTTAAGGGAATATCCGAAAAACTCGTTAAAAACGCTAAA CCAGCATTGGATGCTCCTATGACTTTTGGTTTTGCTCCAAACGCTGTTCTTATTGGATTCTTGGCAAGCTTTGCTGGCGG AATTGTTGGAATGGTTATTATGGCTTTGGCTGGCACAACAGTTGTTATTCCAGGAATTGTTGCGCACTTTATGGCTGGTG GTGTTACTGGCGTATTTAGCAACGGCCAAGCTGGTAGAAGAGGCTGCGTTGTAGGCGGTTTTGTTAATGGTATTGTTATT ACATTCTTGCCGTTACTTCTTTTGCCTGTTTTGGGTAATCTTGGTTCTGCAAACTCCACTTATTCAGACGCTGATTTTGG TGTAACTGGAGTTTTTCTTGGTTACACGAATGTTGCAGGAGGCAAAATCGTAAGTATTATTGCAGTTGTAATATCTTATA TTCTTTTCTATGCGTCTTCAATATTGTTGACTCGCAGAGAAAATAGTAAAGTCAAATATGCAATTGAAAACTAA Protein sequence : MPKSAHILIKIYKERTMNGVLSILLDVFRQPSVIVAMISLIGLAVQGKKISDIVQGSIRTMIGFLVLAAGSGVVTEALNP FGSMFQYAFHVQGVVPNNEAIIGTVLMKYGSEAALIFFFGMIVNIVLSITSRFKFIYLTGHVAFYMASMLAVIFNVAGFD TLTVIILGSFAQGLLITISPALVQSFMRTASGKDDVALGHPTSSGVLIGTLIAKLTASKKHPSKSTEDIKFPAALGFLKD TTVLIALSMAIIYAVVALFAGPQYIESHLSNGQNFIVFVILKAAMFSAGVFIILAGVQVVLDEIVPAFKGISEKLVKNAK PALDAPMTFGFAPNAVLIGFLASFAGGIVGMVIMALAGTTVVIPGIVAHFMAGGVTGVFSNGQAGRRGCVVGGFVNGIVI TFLPLLLLPVLGNLGSANSTYSDADFGVTGVFLGYTNVAGGKIVSIIAVVISYILFYASSILLTRRENSKVKYAIEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 3e-86 | 48 |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 3e-86 | 48 |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 3e-86 | 48 |
