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Name : leuS (HMPREF0421_20733) Accession : YP_003985838.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Unknown Product : leucyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0495 EC number : 6.1.1.4 Position : 905657 - 908641 bp Length : 2985 bp Strand : + Note : COG: COG0495; Pfam: PF09334,PF00133,PF08264; InterPro: IPR002302 DNA sequence : ATGGAAGACAACGATCAACAGTATTCAACAGCTGACAATAAAGCTACTATTGCTGAGCCAGCTTTTCGTTACAATGCGCA GCTCGCACAAGATATTGAGCAGCGCTGGCAAAAGACTTGGGACGAGCAGGGCACGTTCTGGGCTGCTAATGTTAAGGGCG ATTTGAAGGATGGCGAAGGCAGATTGGCTTGTGGCCGTCCTTCTTTCTTTGCAATGGACATGTTCCCTTATCCTTCTGGA AAGGGCTTGCATGTTGGACATCCTCTTGGATATTTGGCAACGGATGTTGTGAGCCGATATCACCGTATGAAGGGCGAGAA TGTTCTTCACGCGATGGGCTACGACGCTTTTGGACTTCCTGCAGAACAATATGCTGTTCAAACAGGTCAGCATCCGCGCA TTACTACTGAGGCAAATATTGCAAATATGCGCAGGCAGTTGCATCGCATGGGATTGAGCTTTGACGATCGTAGATCTTTT GCAACTATTGATACAAACTACGTTCGTTGGACTCAATGGATTTTCTCGAAGCTTTATGACGCTTGGTATGACCCTGATTT TGTACGCAAAGATGGCGGTAAAGGTTCTGCTCGACCAATTGCTGAGTTAGTTGATGAGTTTAAGAGCGCAAAGCGCGAAA TTCCTGGTTTTGCTGACAAAAAGTGGGGAGAGCTCAATAAAGTAGATCAAGCGGATGTGTTGAATGACTTCCGCATTGCT TACATTTCTAAGTCTCCTGTAAATTGGTGTCCAGGATTGGGAACTGTGCTTGCAAACGAGGAAGTTACTGCAGAAGGTAA ATCTGAGCGCGGAAACTTCCCAGTATTCCAGCGCAATCTTCGTCAGTGGTCCATGCGAATTACAGCTTATGCTCATCGCT TGGTTGAAGATTTGGATACTATTGATTGGCCAGAAAAAGTTAAGCTTATGCAGCGAAACTGGATTGGCGAATCTCACGGT GCTTCCGTGCATTTTGAAGTTGAATGTGCAGATGGTGAAACGCGCGATTTGGAAGTATACACTACTCGTCCAGATACGCT TTTTGGTACAACTTTTGCTGTTGTTTCTGTAGATCACCCGATTCTTGAGCACGTTCCAGAAGCGTGGGAAGCTAGCGTTC CAGAAAGCTGGAAGGGTGGCTACGCAAGCCTTAAGGAAGGATTGGCAGAGTATCAGGCTCAAGCTCGCGCTAAAACCGCT AAAGATCGTACGGAAGACGCTGGTGCAAAAACTGGTTTGTTTACTGGTCTTTACGCAATTAATCCTGTAACTGGAGCAAA ACTTCCGCTGTTTGTTGCAGATTATGTGCTTATGGGTTATGGAACGGGCGCAATTATGGCAGTTCCTGGCGGTGACCAGC GCGATTATGATTTTGCTAAAGCTTTCGGCTTGTCTGTAATTTACACTGTTAAGCCTTTGCCTGATTCTGTCGAAAAGCTA GAAGATTATGATGGCAAAGCTCCGTTTGTTTCTCACGATGGAATTGTTATTAACTCTTCTGTGGAGCATACTTATAAGCT CGGTGACGCTTTGTCTATTAACGGTTTGCGCGTAGATGAAGCTATTAAAAAAGTGACGACTTGGCTTGAAGCAGCAGGCG TAGGCGTTGGTAAGGTTTCTTACAGACTTCGCGATTGGCTGTTCTCTAGGCAGCGCTACTGGGGTGAGCCATTCCCAATC GTTTATGATGAGGATGGTGTTGCTCACCTTGTGCCGGATAGTGAGCTTCCAATTGCATTGCCAGACGTTCCAGATTATCA GCCAAAAACTTACGCTCCAGACGACGCAAATTCTGAGCCTGAAGCACCTTTGAGCCGAAACGAGGATTGGGTTAAAGTTC AGCTTGATCTTGGTGACGGTGTAAAAACCTACTATCGCGACACCAACACTATGCCAAACTGGGCTGGTTCATGCTGGTAT TACATGCGTTACTTGGATCCAAACGACGCTGAGCATATGGTTGACAGCGACGAATACGACTATTGGATGGGTACGAATCG ACCAGGCAAGGAACATGTTTCTGGAGGCGTTGACCTTTATGTTGGAGGCGTAGAGCATGCAGTTTTGCACTTGCTTTACT CGCGCTTCTGGCATAAGGCGCTTTACGACTTGGGTTACGTTGATTCTGCTGAGCCTTTCCATCGCTTGTTTAACCAGGGT ATGATTCAGGCTTACGCTTACACGGATGAGCGCGGGCAGTACGTGCCAGCTGATGAGGTTGAGGAAGGCGCTAATAACGG CGTTGGTGAGCCAACATTTACTTGGCACGGCGAAACCGTGAATCGCGAGTTTGGAAAGATGGGCAAGAGCCTAAAGAATA TTGTGACTCCAGACTACATGTACGAAAATTACGGTGCAGACACGTTCCGTTTGTATGAAATGAGCATGGGTCCACTTTCT GAGTCTCGCCCATGGAATACGCGTAACGTTGTTGGAGGCATGCGATTCTTGCAACGCTTGTGGCGTAACGTTGTAAACGA AGAAACTGGCGCTTGCGTAGTAACAGAAGATGCTTTGGACGAAAAGACGCTAAAGCTTCTTAACAACACGATTGTAGAAG TAACTGTAGAAATGGAAGCAATGCGTCCAAACACTGCGATTGCTAAGCTGATTGTGTTGAATAATCACTTAACGTCTCTG CCTCACGTGCCTCGCGCAGCAGTTGAGCCGCTTGTTCTTATGCTTTCTCCAATTGCACCGCATATTTGTGAAGAAATGTG GAGCAAGCTTGGACATACTAAGTCGATTGCTCACGCAGATTGGCCAGTTGAAGATTCCCGCTACGTTGGTGCGGATACTG TTACAGCTGTTGTACAAATCAAGGGCAAGGTTCGCGCAAAGCTTGAAGTTGACCCGAATATTGATGCTAGTGAGCTTGAA AAGCTTGCTTTAGAGGCCGTAGCTGATCGCTTGGGTGGAAAGAAGCCGCGCAAGGTAATCGTGAAAGCACCAAAGATTGT GTCTATTGTGCCAGATGAAAGCTGA Protein sequence : MEDNDQQYSTADNKATIAEPAFRYNAQLAQDIEQRWQKTWDEQGTFWAANVKGDLKDGEGRLACGRPSFFAMDMFPYPSG KGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAEQYAVQTGQHPRITTEANIANMRRQLHRMGLSFDDRRSF ATIDTNYVRWTQWIFSKLYDAWYDPDFVRKDGGKGSARPIAELVDEFKSAKREIPGFADKKWGELNKVDQADVLNDFRIA YISKSPVNWCPGLGTVLANEEVTAEGKSERGNFPVFQRNLRQWSMRITAYAHRLVEDLDTIDWPEKVKLMQRNWIGESHG ASVHFEVECADGETRDLEVYTTRPDTLFGTTFAVVSVDHPILEHVPEAWEASVPESWKGGYASLKEGLAEYQAQARAKTA KDRTEDAGAKTGLFTGLYAINPVTGAKLPLFVADYVLMGYGTGAIMAVPGGDQRDYDFAKAFGLSVIYTVKPLPDSVEKL EDYDGKAPFVSHDGIVINSSVEHTYKLGDALSINGLRVDEAIKKVTTWLEAAGVGVGKVSYRLRDWLFSRQRYWGEPFPI VYDEDGVAHLVPDSELPIALPDVPDYQPKTYAPDDANSEPEAPLSRNEDWVKVQLDLGDGVKTYYRDTNTMPNWAGSCWY YMRYLDPNDAEHMVDSDEYDYWMGTNRPGKEHVSGGVDLYVGGVEHAVLHLLYSRFWHKALYDLGYVDSAEPFHRLFNQG MIQAYAYTDERGQYVPADEVEEGANNGVGEPTFTWHGETVNREFGKMGKSLKNIVTPDYMYENYGADTFRLYEMSMGPLS ESRPWNTRNVVGGMRFLQRLWRNVVNEETGACVVTEDALDEKTLKLLNNTIVEVTVEMEAMRPNTAIAKLIVLNNHLTSL PHVPRAAVEPLVLMLSPIAPHICEEMWSKLGHTKSIAHADWPVEDSRYVGADTVTAVVQIKGKVRAKLEVDPNIDASELE KLALEAVADRLGGKKPRKVIVKAPKIVSIVPDES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| leuS | YP_281511.2 | leucyl-tRNA synthetase | Not tested | Not named | Protein | 1e-135 | 45 |
