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Name : HMPREF0421_20715 (HMPREF0421_20715) Accession : YP_003985820.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : 3.6.3.- Position : 885407 - 886147 bp Length : 741 bp Strand : - Note : COG: COG1116; Pfam: PF00005; InterPro: IPR003593 DNA sequence : ATGAACATTCAAAACAATGAAAATAATGCTAATAATGTCAACAATTCCTACTGTGTTTCTTTAACGCATATTGAAGTAGC ATTTGACGACACTTATAAGGTTTTGAAAGATATTAATTTAAACATTAAGCAAGGCGAGTTTGTCTCACTTATTGGCAGAT CAGGTTGCGGAAAAACAACGCTTCTTAAAGTAATATCTGGTTTATTAAAACCTACAAGCGGCAGTATAAACGTTACAGAC ATGCAGGCTATAGGATTCCAAGATGCAAGATTAATCCCATGGCTAAAAATTGGTGAAAACGTTGTTTTTGGTCTTTCAGA CAGTAAAAACAATCTTAAAAAACTTGCAAATAATGCTCTTAGCAAAATGCAATTAGAAGAATACGCCAATAAATGGCCTT CTCAACTTTCTGGCGGTCAAGCTCAACGCGTCTCTTTAGCTAGAGCATTAGTAAGAAACCCAGAGCTATTGCTTTTAGAC GAACCTTTCGGCGCATTAGATGCTTTAACAAGACTAGACATGCAAGATCTTCTAGCTAAGCTAAGAACACAAAACGGCTG GAGCACAATCATGGTTACTCACGATATTGCGGAAGCTGTAAGATTATCAGATCGTATTCTAATGCTTCAAAATGGCGTAA TATCAAGGCAATGGAATATCGATAGGAGCAGTGTTGATTCGCAAGGAAGACCTACAAATCATGTTTCTATTGAAGATGAT TTAAGACTTGCCTTAAAGTGA Protein sequence : MNIQNNENNANNVNNSYCVSLTHIEVAFDDTYKVLKDINLNIKQGEFVSLIGRSGCGKTTLLKVISGLLKPTSGSINVTD MQAIGFQDARLIPWLKIGENVVFGLSDSKNNLKKLANNALSKMQLEEYANKWPSQLSGGQAQRVSLARALVRNPELLLLD EPFGALDALTRLDMQDLLAKLRTQNGWSTIMVTHDIAEAVRLSDRILMLQNGVISRQWNIDRSSVDSQGRPTNHVSIEDD LRLALK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 5e-29 | 41 |
