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Name : HMPREF0421_20630 (HMPREF0421_20630) Accession : YP_003985735.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Unknown Product : ABC transporter binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 783805 - 784653 bp Length : 849 bp Strand : - Note : COG: COG1464; Pfam: PF03180; InterPro: IPR004872 DNA sequence : ATGAAAATCACAAAGAAGAACACAAAGATTATTGCAGCTTTTACAGCACTAACTGCGATTTTGGGGCTTTCACTAAGCGC ATGCGGATCTTCTGCAAATGGAGCAACTAAAGACGATAAGGTGATTAAGGTTGCAGCTTCCCCAACTCCTCACAGCGATA TTTTGAACAAAGTAGTTAAGCCAATTTTGCAAAAACAAGGCTATAAGTTGGTTGTTAAGGAATTTACTGACTACGTGCAA CCAAATACTGCTGTAGAAGAAGGCGAAGCAGACGCAAACTACCATCAGCATTTGCCATACTTAGATAACTTTAATAAAGA AAGAGGAACGCATATTATTTCTATTGCTGGAATCCACTTTGAACCATTTGGACTTTACCCAGGAAAGACTAAAACAATTA AGGACTTAAAAGATGGCGCAACAGTTGCGGTTCCTAGCGACCCAACCAACGAAGCTCGCGCACTTCTTCTTTTGCAAGAT GCAGGTCTTCTTAAGCTAAAGAATCCAAAGGATGTTAACGCAACAAAGAAAGATATTGTTTCTAATCCAAAGAATCTAAA GTTTAAGGAAATAGACGCTGCTTTGGTTCCAACAGTTGTTAAGGACGTTGATTTAGCTGCTCTAAACGGAAACTACGCTA TTCAAGCTGGATTTAACCCAACTAAAGATCCTCTTACAAGCGAAAAAGTTGGAGGCGTAGCTGCTAAGACATACGAAAAC ATTATTGCTGTTAAGAAAGGATCCGAAAAGCTTGCTAAAATCAAGGCTCTTGTAAAAGCGTTAAAAACAGATGCAGTTCG TGATTTTATAAAGAAAAACTACAACGGCGCTGTTTTGCCAGTTTTCTAA Protein sequence : MKITKKNTKIIAAFTALTAILGLSLSACGSSANGATKDDKVIKVAASPTPHSDILNKVVKPILQKQGYKLVVKEFTDYVQ PNTAVEEGEADANYHQHLPYLDNFNKERGTHIISIAGIHFEPFGLYPGKTKTIKDLKDGATVAVPSDPTNEARALLLLQD AGLLKLKNPKDVNATKKDIVSNPKNLKFKEIDAALVPTVVKDVDLAALNGNYAIQAGFNPTKDPLTSEKVGGVAAKTYEN IIAVKKGSEKLAKIKALVKALKTDAVRDFIKKNYNGAVLPVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 2e-31 | 43 |
