Gene Information

Name : HMPREF0421_20572 (HMPREF0421_20572)
Accession : YP_003985677.1
Strain : Gardnerella vaginalis ATCC 14019
Genome accession: NC_014644
Putative virulence/resistance : Unknown
Product : cobalt transport protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0619
EC number : -
Position : 707606 - 708499 bp
Length : 894 bp
Strand : +
Note : Pfam: PF02361

DNA sequence :
GTGAATAAAACTAGTAGTGCAGAAGAATCGTCTAGTATTAAAGTTAAAGACTTTGAAAGTTTATTAAAAGTTTCGCATAT
TGATGTAACAGCGTCTTCTAAACGTTTAGAAAGTGAACGACTAGTTTCGCCTTCTTGGTTTATTCGTAAGCTTAATCCAA
TAAGTCGTTTTATTGGAGCGTTATTACTTTGCTTGCCTATGTTCGTTACATTAGATATTGTTTCTGCTTCTATTGCATTT
GGTTTAGATATACTGTTATTTGCAATTGCTGGAGTAACTCCTTGGTATGTTTTACGCCATACTTGGCCAGTTTGGATTGC
TGCTTCTGGTAGCTTTATATCTGTGCTTTTATATGGCCAAAGTTCTGGAGATGATATATTTAAGTTTGGCTGGATGCATA
TAAGCCAAGGATCATTGTATTTGGCAATTTGTACGTTTGTTCGTGTTGCATCTGTAGCAGTTCCAGGCGTTATATTAGCC
ATTGGATTAGATCCAACTGATTTAGCAGACGGCTTAGTGCAGATTTTGCATTTTTCTCCACGATTTGTGTACGGAGCATT
AGCTGGATTGAGAATGTTTAGTCTATTGCAAAATGATTGGCGTGCTTTTGGTTTAGCTCGCAGGTCTCGTGGTATATCGG
ATGGTAAAGCGTTACAGCGCATGCTTTCGCAATCTTTTGGTTTGCTCGTGTTATCTATTCGCAGAGGTACGAAACTTGCT
ACAGCTATGGAAGCTAGGGCTTTTGGAAGTAGTATTAAACGTGTTCCAGCACGAAAATCGAAGTTAACAGCATACGATTG
GATATTTTATGTAATTTGCATTGCTGTTCCTGCTATTGCTTTATATGCTTCAATACAAACAGGATATTGGCATAATGCGT
TTATTCATATGTAA

Protein sequence :
MNKTSSAEESSSIKVKDFESLLKVSHIDVTASSKRLESERLVSPSWFIRKLNPISRFIGALLLCLPMFVTLDIVSASIAF
GLDILLFAIAGVTPWYVLRHTWPVWIAASGSFISVLLYGQSSGDDIFKFGWMHISQGSLYLAICTFVRVASVAVPGVILA
IGLDPTDLADGLVQILHFSPRFVYGALAGLRMFSLLQNDWRAFGLARRSRGISDGKALQRMLSQSFGLLVLSIRRGTKLA
TAMEARAFGSSIKRVPARKSKLTAYDWIFYVICIAVPAIALYASIQTGYWHNAFIHM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0907 YP_005159999.1 ABC transporter permease Not tested Not named Protein 2e-38 44