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Name : HMPREF0421_20571 (HMPREF0421_20571) Accession : YP_003985676.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 706014 - 707603 bp Length : 1590 bp Strand : + Note : COG: COG1122; Pfam: PF00005; InterPro: IPR003593 DNA sequence : ATGCAATTTGTGAATAAAACTGAATGGACTCCAGCTAGCGTAGTTGCTAAAAACTGGGGTTGGAGACACGCTACTCGCAA AGATTTTGTGTTGAGGAATGTAAATATTGATATTAATCCTGGTGAGCATGTGTTGCTTTTAGGTGCTTCTGGCGCTGGAA AAAGCACATTTATGGCTGGTTTAGCAGGTGTTTTAGGCGATGAAACAGAAGGCATGGAAGAAGGTAGCCTTCTAATCGGT GGTGTTCATGCTAGGGATGCTCGCGGAAAAGTTGGACTTGTTATGCAAGATCCAGATTCTCAAATCATTCTTGAAAGAGT AGGTGACGATGTAGCTTTTGGAAGTGAGAATCTTGGAGTTGATAGCGAAGAGACTTGGAATCGCGTAAAGCTTTCGCTAG AAGCTGTTGGTTTAGACAATATTACTCAAGGAAGTCAGGGTCTTAGACGCTCAACACAATCTTTATCTGGAGGCCAAAGG CAACGTCTTGCTTTAGCAGGAGTGCTTGCAATGCATCCTGGATTGCTGCTTTTAGATGAGCCTACAGCTAATCTTGATCC TGAAGGTGTTCAGCAAGTGCATGATGCTGTAGCGAATATTCTTAAAAAAACAGGTTCTACAATGATTGTAGTTGAACATC ATATTGATGTGTGGCTGGATTTGATTGATAGAGTTATTGTTATTGGAAAAGATGAAAATAATAATGATTCAAATGTAGGA TGTGTTATTGCAGACGGTAAGCCTGAGGATGTTTTTGAAAAATATGGCGATATGCTTGCAAAAGGTGGTGCTTGGGTTCC AGGAAGAACAGTTAAATCTTTTGCTCCTAAACATTGCGATGACGAGATCAAAGACGAAATAAAAGACGAGATCAAAGATA CGGAAGAATCTGTTGCGCTCTATACTAATGATTGCTCTTTTGGAAGAACTCTGCCACTAGCTGAACATGTTAATGTAGCT TTTCGTTTTGGCGAAGTAACGGCTTTAATGGGACCTAATGGTGCTGGTAAAACTACGCTAGCGTTAACGCTTGCAGGCTT GTTAAAACCAATTGCCGGCAGTGTGTGCATGATGGAAAAGTATGTGCCAAAACGACGTAAAAATAATCTTTTTACTTGGA AAAGTCAAGAATTATTAGGGCGAGTTGGCATGGTGTTTCAGGAGCCAGAACATCAATTCATAACATCTTCTGTAAGAGAT GAAGTTGCTGTAGGGCCTAAAAAGCAAGGAAAAAACGAAAAGGAATCTTACGATATTGCCGATAGCATGCTTGAACGTAT GGATTTGAAGCGTTTTGCTCTTGCTAATCCTTACACATTATCTGGAGGAGAAAAACGTAGACTTTCTGTAGCTACGCTTT TAGCTGCTGCTCCGCGTGTTGTTATTATGGATGAGCCTACTTTTGGACAAGATTTTAAAACTTGGACAGCAATGGTAAAA CTTATTGCGCAAATCCGCGATAGTGGCTCAGCGGTGATTATGGTTACTCACGATGATGAGCTTGTAAAGTCTTTAGATGC CAGAGTAATAAGAGTTGAGTACGAAAAAATCGTAGAGTCCGCTCATAACTATAGCGAAGGGAATGAGTAG Protein sequence : MQFVNKTEWTPASVVAKNWGWRHATRKDFVLRNVNIDINPGEHVLLLGASGAGKSTFMAGLAGVLGDETEGMEEGSLLIG GVHARDARGKVGLVMQDPDSQIILERVGDDVAFGSENLGVDSEETWNRVKLSLEAVGLDNITQGSQGLRRSTQSLSGGQR QRLALAGVLAMHPGLLLLDEPTANLDPEGVQQVHDAVANILKKTGSTMIVVEHHIDVWLDLIDRVIVIGKDENNNDSNVG CVIADGKPEDVFEKYGDMLAKGGAWVPGRTVKSFAPKHCDDEIKDEIKDEIKDTEESVALYTNDCSFGRTLPLAEHVNVA FRFGEVTALMGPNGAGKTTLALTLAGLLKPIAGSVCMMEKYVPKRRKNNLFTWKSQELLGRVGMVFQEPEHQFITSSVRD EVAVGPKKQGKNEKESYDIADSMLERMDLKRFALANPYTLSGGEKRRLSVATLLAAAPRVVIMDEPTFGQDFKTWTAMVK LIAQIRDSGSAVIMVTHDDELVKSLDARVIRVEYEKIVESAHNYSEGNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDBH8_0906 | YP_005159998.1 | ABC transporter ATP-binding protein | Not tested | Not named | Protein | 1e-63 | 42 |
