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Name : glnA1 (HMPREF0421_20432) Accession : YP_003985537.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Virulence Product : glutamate--ammonia ligase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 522410 - 523894 bp Length : 1485 bp Strand : - Note : COG: COG0174; Pfam: PF03951,PF00120; InterPro: IPR004809 DNA sequence : ATGCAACAATCTAAACTATTTACTGAGATTTTTACGAAAGGATTGTGCATGACCACTTTACAAACTAAAGAAGATGCCGA AGCTTTGATTAAGCAAGAAGGCATTGAATACGTATCAGTTCGATTTACCGATTTGATTGGCGTTCAGCAGCATTTTACTG TGCCTGCAAGCGAGTTCTTAAACAGCGCTTTTACAGATGGGATGGCTTTCGACGGCTCTTCTATGCAAGGATTCCAAGCT ATTAACGAGTCCGATATGAAGCTGATTCCAGACGTAGACACCGCATACATTGACCCATTCCGCAAGCATAAGACTTTGAA TGTTGCTTTTTCGATTGTGGATCCTGTAACAGACGAGCCTTATTCTAGGGACCCTCGCCAAGTGGCAATTAAAGCCGAAG CCTACTTAAAGGCAACTGGCATTGCCGATACCGCAAGCTTTGCTCCAGAAGCCGAGTTCTTCATTTTTGACAAGGTGCGT TTTGCAAACGACATGCAACGCTCCTTCTACGAGGTGGATTCCAACGAAGCTCCATGGAATTCTGGCATTGATACTGAAGA TGATGGCAGCAACAACATTGGTTTTAAGAATCGCGTAAAGCACGGCTACTTCCCTGTTCCACCTGTTGATCATAATCAAG ACTTGCGCGACGACATGGTTTACAACCTTCAAAAGGTTGGCTTGATTCTTGAGCGTTCTCACCATGAGGTTGGCGGCGCA GGTCAGCAGGAAATCAACTACCGTTACAATACGCTTGTTCATGCTGGCGACGACTTAATGAAATACAAGTACGTTGTTCA CGAGACTGCTGCTTTGGCTGGTAAGGCTGCAACATTTATGCCTAAGCCAATTGCTGGAGATAACGGCACTGGCATGCACT GCCATCAGTCGCTTTGGAAGGATGGTAAGCCATTGTTCTATGCGGAAACTGGTTATGCTCAGCTTTCCGATATTGCGCGC TGGTACATTGGCGGCTTAATTAAGCACGCGTCTTCTGTGCTCGCTTTTACAAATCCTTCACTTAACTCTTACCACCGCCT TGTTCCAGGATACGAAGCCCCAGTCAACTTGGTTTACTCTGCTCGTAACCGTTCTGCAGCTATTCGTATTCCTCTTGCTG GAGAGGCTCCTTCTGCTAAGCGCATTGAGTTCCGCGCTCCGGATCCTTCCTGCAATCCATTCTTAGCGTTCTCTGCTCAG CTTATGGCTGGCTTAGACGGCATTATGAACCACATTGAGCCTCCTGCTCCTGTTGATAAAGATCTCTACGAGCTTCCTCC AGAAGAGCATGACGGCATTAAGCAAGTTCCTTCTTCACTTGGTGAGGCTTTGCAAGCTTTGGAAGAAGATCACGACTTCC TTATGCAAGGAGATGTGTTTACTAGCGACTTGATTGAAACTTGGCTTAATCTAAAGCATGAAGAGATGGATATGGCTCGT TTGGCTCCAACGCCACTCGAGTATGAGCTTTACTTCCATATCTGA Protein sequence : MQQSKLFTEIFTKGLCMTTLQTKEDAEALIKQEGIEYVSVRFTDLIGVQQHFTVPASEFLNSAFTDGMAFDGSSMQGFQA INESDMKLIPDVDTAYIDPFRKHKTLNVAFSIVDPVTDEPYSRDPRQVAIKAEAYLKATGIADTASFAPEAEFFIFDKVR FANDMQRSFYEVDSNEAPWNSGIDTEDDGSNNIGFKNRVKHGYFPVPPVDHNQDLRDDMVYNLQKVGLILERSHHEVGGA GQQEINYRYNTLVHAGDDLMKYKYVVHETAALAGKAATFMPKPIAGDNGTGMHCHQSLWKDGKPLFYAETGYAQLSDIAR WYIGGLIKHASSVLAFTNPSLNSYHRLVPGYEAPVNLVYSARNRSAAIRIPLAGEAPSAKRIEFRAPDPSCNPFLAFSAQ LMAGLDGIMNHIEPPAPVDKDLYELPPEEHDGIKQVPSSLGEALQALEEDHDFLMQGDVFTSDLIETWLNLKHEEMDMAR LAPTPLEYELYFHI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 5e-83 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA1 | YP_003985537.1 | glutamate--ammonia ligase | VFG1399 | Protein | 4e-144 | 63 |
