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Name : araD (HMPREF0421_20373) Accession : YP_003985478.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : 5.1.3.4 Position : 451237 - 451929 bp Length : 693 bp Strand : + Note : COG: COG0235; Pfam: PF00596; InterPro: IPR001303 DNA sequence : ATGAAAACTTTAAAAGATTATTCAAAAGAAACTCAATCTGAGGTAAAACAGGTACGCGAATTAGTATCCAATTTGCATGA TCAACTTATTAAATGGAATTTAGTTGTGTGGACTGCGGGAAATGTTTCTCAACGTTTGCATACTGCTGATTTAATGGTTA TTAAGCCTTCTGGAGTACGATACGAAAGACTAACTCCTGAATCAATGATTGTTTGTGATCTAGATGGGAATGTTGTTGAT GGATCCTATTCTCCAAGTTCTGACACAGCTTCGCATGCTTATATTTATAGAAATATGCCTGAAGTATTTGGAGTAGTACA CACTCATTCGACTTATGCTACTGCTTGGGCTGCTATTGGAGAAAATATACCGTGTGGATTAACAATGATGGGAGATGAGT TTGGCGGTCCTGTTCCAGTTGGACCATTCAGGTTGATTGGCAGTGAGGCCATTGGGCAAGGCGTTGTTGAAACATTACGC AAATATCCTAAGTCGCCAGCGGTTTTGATGCAAAATCACGGTCCTTTCGTAATTGGAAAAGATGCAGAAAGTGCTGTGAA AGCTGCTGCTATGACAGAAGAAGTAGCCAAAACAATGTGGGCTGCTAGGCAAATAGGGAAAATAATCGATATAAAGAAAG AAGATATCAATTCTCTTAATAAACGATATCAAAATGTTTATGGACAAAACTAA Protein sequence : MKTLKDYSKETQSEVKQVRELVSNLHDQLIKWNLVVWTAGNVSQRLHTADLMVIKPSGVRYERLTPESMIVCDLDGNVVD GSYSPSSDTASHAYIYRNMPEVFGVVHTHSTYATAWAAIGENIPCGLTMMGDEFGGPVPVGPFRLIGSEAIGQGVVETLR KYPKSPAVLMQNHGPFVIGKDAESAVKAAAMTEEVAKTMWAARQIGKIIDIKKEDINSLNKRYQNVYGQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 3e-19 | 43 |
